Variant report

Variant	rs11873825
Chromosome Location	chr18:28434910-28434911
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10502554	1.00[ASN][1000 genomes]
rs10502555	1.00[ASN][1000 genomes]
rs12326260	1.00[ASN][1000 genomes]
rs16961008	1.00[ASN][1000 genomes]
rs16961011	1.00[ASN][1000 genomes]
rs16961031	1.00[ASN][1000 genomes]
rs55669081	1.00[ASN][1000 genomes]
rs72920731	1.00[ASN][1000 genomes]
rs72920754	1.00[ASN][1000 genomes]
rs8094175	1.00[ASN][1000 genomes]
rs8097404	1.00[ASN][1000 genomes]
rs8098117	1.00[ASN][1000 genomes]
rs9807744	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428675	chr18:28278505-28444515	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:28433200-28443000	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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