Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10083906	0.97[ASN][1000 genomes]
rs10853551	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10853552	0.97[ASN][1000 genomes]
rs11082575	0.80[CEU][hapmap];0.83[GIH][hapmap];0.89[TSI][hapmap]
rs11082578	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11082579	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11082582	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11082583	0.97[ASN][1000 genomes]
rs12955529	0.96[ASN][1000 genomes]
rs12956050	0.96[ASN][1000 genomes]
rs1865370	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28687120	0.81[AFR][1000 genomes]
rs34885067	0.97[ASN][1000 genomes]
rs4407146	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7230517	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7230554	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7231544	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7231597	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8088348	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs919979	0.81[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833641	chr18:44815063-45020202	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
2	esv1801141	chr18:44908270-44955409	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3505306	chr18:44925654-44930052	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
4	esv3505309	chr18:44926229-44930077	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44930000-44930200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr18:44930000-44931200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr18:44930000-44932800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr18:44930000-44932800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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