The 2.0 version of rSNPBase

Variant report

Variant rs11884555
Chromosome Location chr2:64177884-64177885
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64114000-64212000 Weak transcription Small Intestine intestine
2 chr2:64129600-64201000 Weak transcription Hela-S3 cervix
3 chr2:64130400-64211200 Weak transcription Fetal Brain Male brain
4 chr2:64137400-64204800 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr2:64139800-64220600 Weak transcription Brain Cingulate Gyrus brain
6 chr2:64140400-64187600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr2:64140400-64188800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr2:64141200-64187600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr2:64141400-64189200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr2:64142800-64189200 Weak transcription Brain Substantia Nigra brain
11 chr2:64147600-64178000 Weak transcription A549 lung
12 chr2:64154400-64202600 Weak transcription Spleen Spleen
13 chr2:64154600-64202600 Weak transcription Pancreas Pancrea
14 chr2:64154800-64242600 Weak transcription Aorta Aorta
15 chr2:64159200-64181400 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr2:64159600-64197800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr2:64159600-64211600 Weak transcription H1 Cell Line embryonic stem cell
18 chr2:64162800-64183600 Weak transcription HSMMtube muscle
19 chr2:64163200-64207600 Weak transcription HUVEC blood vessel
20 chr2:64165600-64193600 Weak transcription NHLF lung
21 chr2:64165800-64202600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr2:64166800-64202600 Weak transcription HMEC breast
23 chr2:64167400-64178000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:64168400-64198000 Weak transcription Fetal Heart heart
25 chr2:64168600-64188000 Weak transcription NH-A brain
26 chr2:64168600-64202600 Weak transcription Esophagus oesophagus
27 chr2:64168600-64202600 Weak transcription K562 blood
28 chr2:64168800-64178000 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr2:64168800-64192800 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr2:64168800-64195000 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr2:64168800-64204800 Weak transcription Psoas Muscle Psoas
32 chr2:64169000-64178400 Weak transcription Brain Anterior Caudate brain
33 chr2:64169000-64189200 Weak transcription Primary T cells fromperipheralblood blood
34 chr2:64169000-64215000 Weak transcription Brain Angular Gyrus brain
35 chr2:64169600-64178800 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr2:64170800-64178000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr2:64171800-64194000 Weak transcription NHEK skin
38 chr2:64172200-64181200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr2:64172800-64178200 Strong transcription Liver Liver
40 chr2:64173600-64188600 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr2:64173600-64189200 Weak transcription Primary B cells from peripheral blood blood
42 chr2:64173600-64202800 Weak transcription Fetal Brain Female brain
43 chr2:64173800-64188000 Weak transcription GM12878-XiMat blood
44 chr2:64174600-64178000 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr2:64174800-64178200 Strong transcription Placenta Placenta
46 chr2:64174800-64178600 Strong transcription Fetal Thymus thymus
47 chr2:64174800-64178800 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr2:64174800-64178800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr2:64175000-64178000 Strong transcription Dnd41 blood
50 chr2:64175200-64178200 Strong transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015