Variant report

Variant rs1188710
Chromosome Location chr1:228528563-228528564
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228504400-228529600 Weak transcription Colonic Mucosa Colon
2 chr1:228508800-228530200 Weak transcription Duodenum Mucosa Duodenum
3 chr1:228510000-228531000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:228510200-228531200 Weak transcription Hela-S3 cervix
6 chr1:228511200-228530000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:228511400-228528600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
9 chr1:228512400-228532200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:228512800-228529200 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:228512800-228531400 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:228512800-228532600 Weak transcription Primary hematopoietic stem cells blood
13 chr1:228513400-228531400 Weak transcription Fetal Kidney kidney
14 chr1:228518800-228534200 Weak transcription Right Atrium heart
15 chr1:228519000-228528800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:228519200-228531400 Weak transcription Brain Cingulate Gyrus brain
17 chr1:228520000-228538000 Genic enhancers Skeletal Muscle Male skeletal muscle
18 chr1:228520200-228531800 Strong transcription Thymus Thymus
19 chr1:228520200-228532000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:228520200-228532000 Strong transcription Left Ventricle heart
21 chr1:228520200-228538200 Strong transcription Fetal Muscle Leg muscle
22 chr1:228520400-228529600 Strong transcription Fetal Intestine Small intestine
23 chr1:228520400-228531400 Strong transcription Right Ventricle heart
24 chr1:228520400-228531600 Strong transcription Fetal Stomach stomach
25 chr1:228520400-228532400 Strong transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:228520400-228535000 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr1:228520400-228535200 Genic enhancers Skeletal Muscle Female skeletal muscle
28 chr1:228520600-228532000 Strong transcription Fetal Brain Female brain
29 chr1:228522000-228541200 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr1:228523400-228529200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:228524400-228530000 Strong transcription Pancreas Pancrea
32 chr1:228524600-228530000 Strong transcription Dnd41 blood
33 chr1:228524800-228531600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:228525000-228530000 Strong transcription Fetal Intestine Large intestine
35 chr1:228525600-228529800 Strong transcription Spleen Spleen
36 chr1:228525800-228529000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:228525800-228531200 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr1:228525800-228531400 Weak transcription A549 lung
39 chr1:228526600-228529600 Strong transcription Fetal Muscle Trunk muscle
40 chr1:228527400-228529200 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:228527400-228529200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:228527400-228531200 Strong transcription Lung lung
43 chr1:228527400-228531400 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:228527400-228531800 Weak transcription H9 Cell Line embryonic stem cell
45 chr1:228527400-228532400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:228527400-228532400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:228527400-228545800 Weak transcription Fetal Brain Male brain
48 chr1:228527600-228529000 Enhancers Placenta Placenta
49 chr1:228527600-228529400 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr1:228527600-228531400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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