Variant report

Variant rs287616
Chromosome Location chr1:228501996-228501997
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228487200-228504600 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:228490800-228506800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr1:228491600-228505800 Genic enhancers Skeletal Muscle Male skeletal muscle
4 chr1:228492200-228503800 Genic enhancers Skeletal Muscle Female skeletal muscle
5 chr1:228497600-228507400 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:228497600-228508400 Weak transcription Psoas Muscle Psoas
7 chr1:228497800-228502800 ZNF genes & repeats Fetal Stomach stomach
8 chr1:228498000-228505400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:228498200-228504400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:228498200-228507000 Weak transcription Fetal Kidney kidney
11 chr1:228498600-228502000 ZNF genes & repeats Fetal Intestine Small intestine
12 chr1:228498600-228506800 Weak transcription Fetal Heart heart
13 chr1:228498800-228505000 Weak transcription Brain Anterior Caudate brain
14 chr1:228499000-228507400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:228499800-228506800 Weak transcription H9 Cell Line embryonic stem cell
16 chr1:228500000-228504000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:228500000-228509400 Weak transcription Right Atrium heart
18 chr1:228500200-228503200 Weak transcription HSMMtube muscle
19 chr1:228500400-228504400 Weak transcription Gastric stomach
20 chr1:228500600-228504600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:228500600-228505800 Weak transcription Fetal Lung lung
22 chr1:228500800-228503000 Genic enhancers Right Ventricle heart
23 chr1:228500800-228503200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:228500800-228504000 Weak transcription Brain Germinal Matrix brain
25 chr1:228500800-228504800 Weak transcription Primary T cells from cord blood blood
26 chr1:228500800-228504800 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:228500800-228506200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:228500800-228506200 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr1:228501000-228503800 Weak transcription Fetal Brain Female brain
30 chr1:228501000-228504800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:228501000-228507000 Weak transcription Fetal Brain Male brain
32 chr1:228501000-228507200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:228501200-228502000 Genic enhancers Fetal Muscle Trunk muscle
34 chr1:228501200-228505400 Weak transcription Dnd41 blood
35 chr1:228501200-228506800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:228501200-228506800 Weak transcription Ovary ovary
37 chr1:228501200-228507000 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr1:228501400-228503600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:228501400-228503600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:228501400-228503600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:228501400-228504200 Genic enhancers Fetal Muscle Leg muscle
42 chr1:228501400-228504200 Weak transcription Lung lung
43 chr1:228501400-228506800 Weak transcription Primary hematopoietic stem cells blood
44 chr1:228501600-228502600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:228501600-228502600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr1:228501600-228503000 Enhancers Pancreas Pancrea
47 chr1:228501600-228503600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr1:228501600-228503600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:228501600-228504800 Weak transcription H1 Cell Line embryonic stem cell
50 chr1:228501800-228502800 Enhancers Left Ventricle heart

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