Variant report

Variant	rs4065229
Chromosome Location	chr1:228463292-228463293
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:48)
CpG islands
(count:61)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:48 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:228463093-228464070	K562	blood:	n/a	n/a
2	POLR2A	chr1:228463290-228463968	K562	blood:	n/a	n/a
3	CCNT2	chr1:228462955-228463732	K562	blood:	n/a	n/a
4	MAX	chr1:228463114-228464474	H1-hESC	embryonic stem cell:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
5	ZBTB7A	chr1:228463235-228463582	K562	blood:	n/a	n/a
6	RCOR1	chr1:228462777-228463320	K562	blood:	n/a	n/a
7	NRF1	chr1:228463112-228463334	H1-hESC	embryonic stem cell:	n/a	chr1:228463268-228463279
8	MAX	chr1:228462969-228464482	K562	blood:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
9	E2F6	chr1:228462892-228463855	K562	blood:	n/a	chr1:228463368-228463378
10	ZNF263	chr1:228463050-228464329	K562	blood:	n/a	chr1:228463756-228463777 chr1:228463818-228463839
11	MXI1	chr1:228462959-228464346	IMR90	lung:	n/a	n/a
12	ELF1	chr1:228463118-228463999	K562	blood:	n/a	chr1:228463333-228463345
13	NR2F2	chr1:228463267-228464076	K562	blood:	n/a	n/a
14	MYC	chr1:228462961-228463953	K562	blood:	n/a	n/a
15	UBTF	chr1:228462928-228463911	K562	blood:	n/a	n/a
16	MYC	chr1:228463240-228463370	K562	blood:	n/a	n/a
17	MAX	chr1:228462751-228464565	K562	blood:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
18	GTF2F1	chr1:228463290-228463629	K562	blood:	n/a	n/a
19	RCOR1	chr1:228462777-228463986	K562	blood:	n/a	n/a
20	GABPA	chr1:228462884-228463413	H1-hESC	embryonic stem cell:	n/a	n/a
21	MAX	chr1:228463059-228463372	K562	blood:	n/a	n/a
22	GABPA	chr1:228462787-228463430	H1-hESC	embryonic stem cell:	n/a	n/a
23	UBTF	chr1:228463073-228463978	K562	blood:	n/a	n/a
24	POLR2A	chr1:228462462-228464298	K562	blood:	n/a	n/a
25	ELF1	chr1:228462816-228463381	K562	blood:	n/a	chr1:228463333-228463345
26	E2F6	chr1:228463221-228463396	K562	blood:	n/a	chr1:228463368-228463378
27	CHD2	chr1:228463165-228464054	K562	blood:	n/a	chr1:228464013-228464023
28	HEY1	chr1:228463059-228463324	K562	blood:	n/a	chr1:228463294-228463309
29	YY1	chr1:228463220-228463445	K562	blood:	n/a	n/a
30	MAZ	chr1:228463122-228464592	IMR90	lung:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
31	TBL1XR1	chr1:228463033-228463312	K562	blood:	n/a	n/a
32	CTCF	chr1:228463160-228463310	HUVEC	blood vessel:	n/a	n/a
33	E2F6	chr1:228462866-228464538	K562	blood:	n/a	chr1:228463368-228463378
34	CBX3	chr1:228462674-228463970	K562	blood:	n/a	n/a
35	ZC3H11A	chr1:228463235-228463349	K562	blood:	n/a	n/a
36	MYC	chr1:228463048-228464394	K562	blood:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
37	RAD21	chr1:228463166-228463870	IMR90	lung:	n/a	chr1:228463284-228463298 chr1:228463278-228463291
38	POLR2A	chr1:228463034-228463888	K562	blood:	n/a	n/a
39	MAZ	chr1:228462906-228464650	K562	blood:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
40	MAX	chr1:228463105-228464537	H1-hESC	embryonic stem cell:	n/a	chr1:228464133-228464140 chr1:228464032-228464041
41	HDAC2	chr1:228463247-228463453	K562	blood:	n/a	n/a
42	HMGN3	chr1:228463005-228464399	K562	blood:	n/a	n/a
43	NRF1	chr1:228463041-228463377	K562	blood:	n/a	chr1:228463268-228463279
44	THAP1	chr1:228462933-228463601	K562	blood:	n/a	n/a
45	SIN3A	chr1:228463050-228464420	H1-hESC	embryonic stem cell:	n/a	chr1:228463377-228463388 chr1:228463342-228463355 chr1:228463377-228463390
46	ZMIZ1	chr1:228463038-228463414	K562	blood:	n/a	n/a
47	SP2	chr1:228463274-228463553	K562	blood:	n/a	n/a
48	POLR2A	chr1:228463170-228463965	PFSK-1	brain:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:228463260-228463310	IMR90	lung:	fetal
2	chr1:228463260-228463310	CMK	blood:	n/a
3	chr1:228463260-228463310	HRE	kidney:	n/a
4	chr1:228463260-228463310	PANC-1	pancreas:	n/a
5	chr1:228463260-228463310	HMEC	breast:	n/a
6	chr1:228463260-228463310	Jurkat	blood:	n/a
7	chr1:228463260-228463310	BE2_C	brain:	n/a
8	chr1:228463260-228463310	GM12891	blood:	n/a
9	chr1:228463260-228463310	NHBE	bronchial:	n/a
10	chr1:228463260-228463310	GM12892	blood:	n/a
11	chr1:228463260-228463310	HAEpiC	amniotic membrane:	n/a
12	chr1:228463260-228463310	GM12878	blood:	n/a
13	chr1:228463260-228463310	K562	blood:	n/a
14	chr1:228463260-228463310	AG10803	skin:	n/a
15	chr1:228463260-228463310	H1-hESC	embryonic stem cell:	embryo
16	chr1:228463260-228463310	MCF-7	breast:	n/a
17	chr1:228463260-228463310	HL-60	blood:	n/a
18	chr1:228463260-228463310	ProgFib	skin:	n/a
19	chr1:228463260-228463310	SK-N-SH	brain:	n/a
20	chr1:228463260-228463310	ovcar-3	ovarian:	n/a
21	chr1:228463260-228463310	AG09309	skin:	n/a
22	chr1:228463260-228463310	SKMC	muscle:	n/a
23	chr1:228463260-228463310	A549	lung:	n/a
24	chr1:228463260-228463310	AG04450	lung:	fetal
25	chr1:228463260-228463310	HRPEpiC	eye:	n/a
26	chr1:228463260-228463310	HCM	heart:	n/a
27	chr1:228463260-228463310	PFSK-1	brain:	n/a
28	chr1:228463260-228463310	T-47D	breast:	n/a
29	chr1:228463260-228463310	HCPEpiC	choroid plexus:	n/a
30	chr1:228463260-228463310	SAEC	small airway:	n/a
31	chr1:228463260-228463310	AG04449	skin:	fetal
32	chr1:228463260-228463310	HCF	heart:	n/a
33	chr1:228463260-228463310	GM19239	blood:	n/a
34	chr1:228463260-228463310	MCF10A-Er-Src	breast:	n/a
35	chr1:228463260-228463310	Hepatocyte	liver:	n/a
36	chr1:228463260-228463310	HEEpiC	esophagus:	n/a
37	chr1:228463260-228463310	HRCEpiC	kidney:	n/a
38	chr1:228463260-228463310	NT2-D1	testis:	n/a
39	chr1:228463260-228463310	HIPEpiC	eye:	n/a
40	chr1:228463260-228463310	PrEC	prostate:	n/a
41	chr1:228463260-228463310	BJ	skin:	n/a
42	chr1:228463260-228463310	LNCaP	prostate:	n/a
43	chr1:228463260-228463310	HCT-116	colon:	n/a
44	chr1:228463260-228463310	AG09319	gingival:	n/a
45	chr1:228463260-228463310	HNPCEpiC	eye:	n/a
46	chr1:228463260-228463310	HPAEpiC	pulmonary alveolar:	n/a
47	chr1:228463260-228463310	AoSMC	blood vessel:	n/a
48	chr1:228463260-228463310	U87	brain:	n/a
49	chr1:228463260-228463310	HUVEC	blood vessel:	n/a
50	chr1:228463260-228463310	SK-N-SH_RA	brain:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:228289703..228291795-chr1:228462279..228463838,2	K562	blood:
2	chr1:228353494..228355911-chr1:228462112..228465805,3	K562	blood:
3	chr1:228401876..228404808-chr1:228460949..228463356,3	K562	blood:
4	chr1:228399534..228402324-chr1:228461653..228463776,2	MCF-7	breast:
5	chr1:228395695..228398626-chr1:228460759..228464017,3	K562	blood:
6	chr1:228328463..228331528-chr1:228462308..228464210,3	K562	blood:
7	chr1:228461884..228463852-chr1:228571777..228574496,2	MCF-7	breast:
8	chr1:228461911..228467066-chr1:228644143..228647181,7	K562	blood:
9	chr1:228293306..228296150-chr1:228462712..228464969,2	K562	blood:
10	chr1:228326053..228331395-chr1:228462710..228467617,6	K562	blood:
11	chr1:228461911..228467066-chr1:228644125..228647181,7	K562	blood:
12	chr1:228351819..228355005-chr1:228461791..228464668,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000269890	TF binding region
OBSCN	TF binding region
OBSCN	CpG island
ENSG00000269890	CpG island
ENSG00000181218	Chromatin interaction
ENSG00000162910	Chromatin interaction
ENSG00000203684	Chromatin interaction
ENSG00000162913	Chromatin interaction
ENSG00000196890	Chromatin interaction
ENSG00000143793	Chromatin interaction
ENSG00000181873	Chromatin interaction
ENSG00000154358	Chromatin interaction
ENSG00000270104	Chromatin interaction
ENSG00000143774	Chromatin interaction

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1150906	0.82[ASN][1000 genomes]
rs1150907	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1150910	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1150913	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1150914	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11810627	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1188697	0.87[ASN][1000 genomes]
rs1188730	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1188731	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12407114	0.82[ASN][1000 genomes]
rs12728259	0.82[ASN][1000 genomes]
rs287603	0.83[ASN][1000 genomes]
rs287606	0.83[ASN][1000 genomes]
rs287609	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs287610	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs287611	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs287612	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs287614	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs287616	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3119591	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3119592	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs391597	0.83[ASN][1000 genomes]
rs395285	0.83[ASN][1000 genomes]
rs397637	0.83[ASN][1000 genomes]
rs407918	0.83[ASN][1000 genomes]
rs412716	0.83[ASN][1000 genomes]
rs424645	0.92[ASN][1000 genomes]
rs435776	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs437129	0.83[ASN][1000 genomes]
rs438382	0.83[ASN][1000 genomes]
rs447902	0.83[ASN][1000 genomes]
rs449133	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs453569	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs481986	0.83[ASN][1000 genomes]
rs482888	0.83[ASN][1000 genomes]
rs510931	0.87[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs536515	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs54108	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs549590	0.86[ASN][1000 genomes]
rs9426532	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:29 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv32853	chr1:227880116-228806209	Enhancers Genic enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	187 gene(s)	inside rSNPs	diseases
2	nsv826908	chr1:227895386-228691100	Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
3	nsv523935	chr1:228038124-228681749	Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	137 gene(s)	inside rSNPs	diseases
4	nsv873253	chr1:228231601-228537942	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
5	nsv873254	chr1:228231601-228543800	Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
6	nsv873255	chr1:228254753-228684779	Genic enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	133 gene(s)	inside rSNPs	diseases
7	nsv827019	chr1:228314167-228651020	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	106 gene(s)	inside rSNPs	diseases
8	nsv1012078	chr1:228340876-228521843	Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	63 gene(s)	inside rSNPs	diseases
9	nsv535320	chr1:228340876-228521843	Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	63 gene(s)	inside rSNPs	diseases
10	nsv873263	chr1:228391808-228494790	Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
11	nsv873264	chr1:228423647-228543800	Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
12	nsv873265	chr1:228434395-228525008	Active TSS Strong transcription Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
13	nsv873266	chr1:228434395-228537942	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
14	nsv873267	chr1:228434395-228585837	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
15	nsv873268	chr1:228442663-228537942	Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
16	nsv873269	chr1:228442663-228543800	Strong transcription ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
17	nsv873270	chr1:228442663-228699477	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
18	nsv1009891	chr1:228450763-228742676	Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
19	nsv873271	chr1:228450868-228470995	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
20	nsv873272	chr1:228450868-228538968	Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
21	nsv873273	chr1:228450868-228556788	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
22	nsv873274	chr1:228450868-228585837	Strong transcription Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
23	esv1798020	chr1:228456147-228556788	Strong transcription Bivalent Enhancer Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
24	esv1818776	chr1:228456147-228556788	Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
25	nsv873275	chr1:228456147-228585837	Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
26	nsv517545	chr1:228456147-228685999	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
27	nsv873276	chr1:228456943-228585837	Weak transcription Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
28	nsv1013500	chr1:228459134-228849601	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
29	nsv827064	chr1:228459934-228469437	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:228455400-228484800	Weak transcription	A549	lung
2	chr1:228456400-228485800	Weak transcription	Hela-S3	cervix
3	chr1:228457200-228472000	Weak transcription	Fetal Heart	heart
4	chr1:228459800-228469600	Weak transcription	HSMMtube	muscle
5	chr1:228461800-228463400	Bivalent Enhancer	Placenta	Placenta
6	chr1:228462400-228464200	Weak transcription	Dnd41	blood
7	chr1:228462600-228463400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr1:228462600-228463400	Flanking Active TSS	Stomach Smooth Muscle	stomach
9	chr1:228462600-228464400	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr1:228462800-228463400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
11	chr1:228462800-228463600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
12	chr1:228462800-228463600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
13	chr1:228462800-228463600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr1:228462800-228463600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
15	chr1:228462800-228463600	Flanking Active TSS	Duodenum Mucosa	Duodenum
16	chr1:228462800-228464000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr1:228462800-228464200	Active TSS	H9 Cell Line	embryonic stem cell
18	chr1:228462800-228464200	Active TSS	NHEK	skin
19	chr1:228462800-228464400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr1:228462800-228464400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr1:228462800-228464400	Active TSS	Duodenum Smooth Muscle	Duodenum
22	chr1:228462800-228464400	Active TSS	Fetal Kidney	kidney
23	chr1:228462800-228464400	Transcr. at gene 5' and 3'	Skeletal Muscle Female	skeletal muscle
24	chr1:228462800-228464400	Bivalent Enhancer	Stomach Mucosa	stomach
25	chr1:228462800-228464600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr1:228462800-228464600	Flanking Active TSS	Adipose Nuclei	Adipose
27	chr1:228462800-228464600	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
28	chr1:228463000-228463400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
29	chr1:228463000-228463400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
30	chr1:228463000-228463400	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
31	chr1:228463000-228463400	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr1:228463000-228463400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
33	chr1:228463000-228463400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
34	chr1:228463000-228463400	Flanking Active TSS	Fetal Lung	lung
35	chr1:228463000-228463400	Flanking Active TSS	Lung	lung
36	chr1:228463000-228463400	Transcr. at gene 5' and 3'	Thymus	Thymus
37	chr1:228463000-228463600	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr1:228463000-228463600	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
39	chr1:228463000-228463600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr1:228463000-228463600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr1:228463000-228463600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr1:228463000-228463600	Flanking Active TSS	Fetal Muscle Trunk	muscle
43	chr1:228463000-228463600	Flanking Active TSS	Fetal Thymus	thymus
44	chr1:228463000-228463600	Transcr. at gene 5' and 3'	Left Ventricle	heart
45	chr1:228463000-228463600	Flanking Active TSS	Placenta Amnion	Placenta Amnion
46	chr1:228463000-228463600	Flanking Active TSS	HUVEC	blood vessel
47	chr1:228463000-228463600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
48	chr1:228463000-228463600	Flanking Active TSS	NH-A	brain
49	chr1:228463000-228463800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr1:228463000-228463800	Flanking Active TSS	Primary B cells from cord blood	blood

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