Variant report

Variant rs510931
Chromosome Location chr1:228463433-228463434
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228455400-228484800 Weak transcription A549 lung
2 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
3 chr1:228457200-228472000 Weak transcription Fetal Heart heart
4 chr1:228459800-228469600 Weak transcription HSMMtube muscle
5 chr1:228462400-228464200 Weak transcription Dnd41 blood
6 chr1:228462600-228464400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:228462800-228463600 Flanking Active TSS Primary T cells fromperipheralblood blood
8 chr1:228462800-228463600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
9 chr1:228462800-228463600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:228462800-228463600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
11 chr1:228462800-228463600 Flanking Active TSS Duodenum Mucosa Duodenum
12 chr1:228462800-228464000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:228462800-228464200 Active TSS H9 Cell Line embryonic stem cell
14 chr1:228462800-228464200 Active TSS NHEK skin
15 chr1:228462800-228464400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:228462800-228464400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:228462800-228464400 Active TSS Duodenum Smooth Muscle Duodenum
18 chr1:228462800-228464400 Active TSS Fetal Kidney kidney
19 chr1:228462800-228464400 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
20 chr1:228462800-228464400 Bivalent Enhancer Stomach Mucosa stomach
21 chr1:228462800-228464600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:228462800-228464600 Flanking Active TSS Adipose Nuclei Adipose
23 chr1:228462800-228464600 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
24 chr1:228463000-228463600 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:228463000-228463600 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
26 chr1:228463000-228463600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:228463000-228463600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
28 chr1:228463000-228463600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:228463000-228463600 Flanking Active TSS Fetal Muscle Trunk muscle
30 chr1:228463000-228463600 Flanking Active TSS Fetal Thymus thymus
31 chr1:228463000-228463600 Transcr. at gene 5' and 3' Left Ventricle heart
32 chr1:228463000-228463600 Flanking Active TSS Placenta Amnion Placenta Amnion
33 chr1:228463000-228463600 Flanking Active TSS HUVEC blood vessel
34 chr1:228463000-228463600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr1:228463000-228463600 Flanking Active TSS NH-A brain
36 chr1:228463000-228463800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:228463000-228463800 Flanking Active TSS Primary B cells from cord blood blood
38 chr1:228463000-228463800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
39 chr1:228463000-228464000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
40 chr1:228463000-228464000 Active TSS Muscle Satellite Cultured Cells --
41 chr1:228463000-228464000 Active TSS Brain Anterior Caudate brain
42 chr1:228463000-228464000 Active TSS Colonic Mucosa Colon
43 chr1:228463000-228464000 Active TSS Esophagus oesophagus
44 chr1:228463000-228464200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr1:228463000-228464200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:228463000-228464200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
47 chr1:228463000-228464200 Active TSS Brain Angular Gyrus brain
48 chr1:228463000-228464200 Active TSS Ovary ovary
49 chr1:228463000-228464200 Active TSS Psoas Muscle Psoas
50 chr1:228463000-228464200 Bivalent/Poised TSS HepG2 liver

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