Variant report

Variant rs419808
Chromosome Location chr1:228526272-228526273
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228504400-228529600 Weak transcription Colonic Mucosa Colon
2 chr1:228508600-228526800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr1:228508800-228530200 Weak transcription Duodenum Mucosa Duodenum
4 chr1:228510000-228531000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:228510200-228528000 Weak transcription Fetal Thymus thymus
7 chr1:228510200-228531200 Weak transcription Hela-S3 cervix
8 chr1:228511200-228526800 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr1:228511200-228530000 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:228511400-228528600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
12 chr1:228511600-228526800 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:228512400-228526600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr1:228512400-228532200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:228512600-228527000 Weak transcription Fetal Brain Male brain
16 chr1:228512800-228526600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:228512800-228526800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:228512800-228526800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:228512800-228529200 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:228512800-228531400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr1:228512800-228532600 Weak transcription Primary hematopoietic stem cells blood
22 chr1:228513400-228531400 Weak transcription Fetal Kidney kidney
23 chr1:228518000-228527000 Weak transcription Fetal Heart heart
24 chr1:228518800-228534200 Weak transcription Right Atrium heart
25 chr1:228519000-228528800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:228519200-228531400 Weak transcription Brain Cingulate Gyrus brain
27 chr1:228520000-228527800 Strong transcription Brain Germinal Matrix brain
28 chr1:228520000-228528400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr1:228520000-228538000 Genic enhancers Skeletal Muscle Male skeletal muscle
30 chr1:228520200-228531800 Strong transcription Thymus Thymus
31 chr1:228520200-228532000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:228520200-228532000 Strong transcription Left Ventricle heart
33 chr1:228520200-228538200 Strong transcription Fetal Muscle Leg muscle
34 chr1:228520400-228527000 Strong transcription Lung lung
35 chr1:228520400-228527600 Strong transcription Primary T cells fromperipheralblood blood
36 chr1:228520400-228529600 Strong transcription Fetal Intestine Small intestine
37 chr1:228520400-228531400 Strong transcription Right Ventricle heart
38 chr1:228520400-228531600 Strong transcription Fetal Stomach stomach
39 chr1:228520400-228532400 Strong transcription Primary T helper naive cells fromperipheralblood blood
40 chr1:228520400-228535000 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr1:228520400-228535200 Genic enhancers Skeletal Muscle Female skeletal muscle
42 chr1:228520600-228528000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:228520600-228528400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:228520600-228532000 Strong transcription Fetal Brain Female brain
45 chr1:228520800-228528400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:228521000-228528200 Strong transcription Placenta Amnion Placenta Amnion
47 chr1:228521200-228528400 Strong transcription Primary T cells from cord blood blood
48 chr1:228521400-228527000 Weak transcription Ovary ovary
49 chr1:228521600-228526400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:228521600-228526400 Weak transcription Primary T helper cells PMA-I stimulated --

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