The 2.0 version of rSNPBase

Variant report

Variant rs429335
Chromosome Location chr1:228520382-228520383
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228504400-228529600 Weak transcription Colonic Mucosa Colon
2 chr1:228508600-228523600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:228508600-228526800 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr1:228508800-228530200 Weak transcription Duodenum Mucosa Duodenum
5 chr1:228509400-228521400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:228510000-228526200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:228510000-228531000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:228510200-228528000 Weak transcription Fetal Thymus thymus
10 chr1:228510200-228531200 Weak transcription Hela-S3 cervix
11 chr1:228511200-228520600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:228511200-228526800 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr1:228511200-228530000 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:228511400-228528600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
16 chr1:228511600-228520600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:228511600-228526800 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:228511800-228520400 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:228511800-228520600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:228512200-228522600 Weak transcription Gastric stomach
21 chr1:228512200-228524800 Weak transcription Esophagus oesophagus
22 chr1:228512400-228526600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:228512400-228532200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:228512600-228520400 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:228512600-228527000 Weak transcription Fetal Brain Male brain
26 chr1:228512800-228520400 Weak transcription Right Ventricle heart
27 chr1:228512800-228520400 Weak transcription Spleen Spleen
28 chr1:228512800-228520600 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr1:228512800-228520600 Weak transcription Dnd41 blood
30 chr1:228512800-228520800 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr1:228512800-228521000 Weak transcription Fetal Intestine Large intestine
32 chr1:228512800-228521400 Weak transcription HSMMtube muscle
33 chr1:228512800-228524200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr1:228512800-228526600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:228512800-228526800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:228512800-228526800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:228512800-228529200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr1:228512800-228531400 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr1:228512800-228532600 Weak transcription Primary hematopoietic stem cells blood
40 chr1:228513000-228520400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:228513000-228520400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:228513000-228520400 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:228513000-228520400 Weak transcription Fetal Intestine Small intestine
44 chr1:228513000-228520400 Weak transcription Fetal Stomach stomach
45 chr1:228513000-228520600 Weak transcription Ovary ovary
46 chr1:228513000-228520800 Weak transcription Pancreas Pancrea
47 chr1:228513200-228520400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:228513400-228531400 Weak transcription Fetal Kidney kidney
49 chr1:228513600-228520600 Weak transcription Fetal Brain Female brain
50 chr1:228513600-228521200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015