The 2.0 version of rSNPBase

Variant report

Variant rs11887829
Chromosome Location chr2:37178871-37178872
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37132400-37192400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:37134600-37192400 Weak transcription Fetal Stomach stomach
3 chr2:37143400-37191000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr2:37143800-37191800 Weak transcription Primary monocytes fromperipheralblood blood
5 chr2:37150200-37191800 Weak transcription Fetal Thymus thymus
6 chr2:37152400-37191800 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr2:37154200-37179400 Weak transcription Brain Anterior Caudate brain
8 chr2:37154600-37179000 Weak transcription Esophagus oesophagus
9 chr2:37154600-37191800 Weak transcription Fetal Intestine Large intestine
10 chr2:37154800-37185600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr2:37155000-37183600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr2:37158000-37183600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr2:37158200-37192000 Weak transcription Ovary ovary
14 chr2:37158600-37191800 Weak transcription Fetal Lung lung
15 chr2:37159000-37191800 Weak transcription Primary hematopoietic stem cells blood
16 chr2:37165000-37190800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr2:37165600-37179000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr2:37165600-37191800 Weak transcription Fetal Intestine Small intestine
19 chr2:37166600-37191600 Weak transcription Dnd41 blood
20 chr2:37168600-37191800 Weak transcription Thymus Thymus
21 chr2:37169600-37179000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:37169800-37186800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr2:37176200-37191800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr2:37176400-37183800 Weak transcription HepG2 liver
25 chr2:37176800-37180400 Enhancers HUES6 Cell Line embryonic stem cell
26 chr2:37177000-37179600 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr2:37177000-37182200 Weak transcription GM12878-XiMat blood
28 chr2:37177200-37180000 Enhancers HUVEC blood vessel
29 chr2:37177200-37180200 Enhancers Skeletal Muscle Female skeletal muscle
30 chr2:37177400-37179000 Weak transcription Primary B cells from peripheral blood blood
31 chr2:37177600-37179200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr2:37177600-37179200 Enhancers H9 Cell Line embryonic stem cell
33 chr2:37177600-37179400 Strong transcription Primary T cells from cord blood blood
34 chr2:37177600-37181000 Enhancers Hela-S3 cervix
35 chr2:37177800-37179200 Enhancers NH-A brain
36 chr2:37177800-37179600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:37177800-37179600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr2:37177800-37180000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:37177800-37180400 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr2:37177800-37180400 Enhancers HUES48 Cell Line embryonic stem cell
41 chr2:37177800-37180400 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr2:37177800-37180400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr2:37177800-37180600 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr2:37178000-37179000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:37178000-37179200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr2:37178000-37180400 Enhancers HUES64 Cell Line embryonic stem cell
47 chr2:37178200-37179200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:37178200-37179200 Enhancers Muscle Satellite Cultured Cells --
49 chr2:37178200-37179600 Enhancers NHEK skin
50 chr2:37178200-37180200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015