Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11894777	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11904762	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1402441	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs17033765	1.00[EUR][1000 genomes]
rs2683675	0.98[ASN][1000 genomes]
rs2683677	0.98[ASN][1000 genomes]
rs2683680	1.00[CHB][hapmap]
rs2683681	1.00[CHB][hapmap]
rs2683683	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2683684	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs28562857	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2860517	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs59725517	1.00[EUR][1000 genomes]
rs59920988	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72897787	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72897797	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72899913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72899928	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899935	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899978	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
2	esv3335541	chr2:67577544-67773907	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67728200-67742800	Weak transcription	Fetal Lung	lung
2	chr2:67730800-67737200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr2:67731200-67741400	Weak transcription	NHDF-Ad	bronchial
4	chr2:67731800-67737400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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