The 2.0 version of rSNPBase

Variant report

Variant rs11902861
Chromosome Location chr2:178212207-178212208
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178187600-178216400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:178187800-178216400 Weak transcription Fetal Muscle Leg muscle
3 chr2:178195200-178213600 Weak transcription Gastric stomach
4 chr2:178197200-178213400 Weak transcription Rectal Smooth Muscle rectum
5 chr2:178197200-178215000 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr2:178197200-178216800 Weak transcription Primary T cells from cord blood blood
7 chr2:178197200-178217600 Weak transcription Primary B cells from cord blood blood
8 chr2:178197600-178217200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr2:178197800-178214000 Weak transcription Stomach Smooth Muscle stomach
10 chr2:178197800-178215400 Weak transcription Dnd41 blood
11 chr2:178198000-178213000 Weak transcription Ovary ovary
12 chr2:178199000-178214400 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr2:178199600-178213600 Weak transcription Brain Angular Gyrus brain
14 chr2:178200800-178213600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr2:178202200-178217400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr2:178203200-178216400 Weak transcription HSMMtube muscle
17 chr2:178203200-178217800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr2:178203400-178215000 Weak transcription Adipose Nuclei Adipose
19 chr2:178203400-178216000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr2:178203400-178216000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr2:178203400-178217000 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr2:178203400-178244400 Weak transcription HSMM muscle
23 chr2:178203600-178213000 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr2:178203800-178214000 Weak transcription K562 blood
25 chr2:178203800-178221600 Weak transcription A549 lung
26 chr2:178208800-178214200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr2:178210400-178212800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr2:178210400-178214600 Weak transcription Fetal Brain Male brain
29 chr2:178210600-178218000 Enhancers HepG2 liver
30 chr2:178211000-178212800 Enhancers Primary hematopoietic stem cells blood
31 chr2:178211200-178212800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr2:178211200-178214400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr2:178211600-178213600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:178211800-178213200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr2:178211800-178214000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:178211800-178214200 Enhancers Brain Hippocampus Middle brain
37 chr2:178211800-178217400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr2:178212000-178213800 Enhancers Brain Cingulate Gyrus brain
39 chr2:178212000-178214200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:178212000-178214200 Enhancers Brain Substantia Nigra brain
41 chr2:178212000-178224400 Weak transcription Fetal Heart heart
42 chr2:178212200-178213600 Weak transcription Esophagus oesophagus
43 chr2:178212200-178215200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015