The 2.0 version of rSNPBase

Variant report

Variant rs2069042
Chromosome Location chr2:178198719-178198720
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178175200-178203000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr2:178187600-178216400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:178187800-178210800 Weak transcription Left Ventricle heart
4 chr2:178187800-178216400 Weak transcription Fetal Muscle Leg muscle
5 chr2:178190600-178202600 Weak transcription NHDF-Ad bronchial
6 chr2:178191000-178200400 Weak transcription Small Intestine intestine
7 chr2:178191600-178202800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr2:178192000-178201800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:178192200-178200000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr2:178193200-178202800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:178194000-178202600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:178195200-178213600 Weak transcription Gastric stomach
13 chr2:178195400-178211400 Weak transcription Fetal Intestine Small intestine
14 chr2:178197000-178202600 Weak transcription Osteobl bone
15 chr2:178197000-178203800 Weak transcription Brain Anterior Caudate brain
16 chr2:178197000-178207600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:178197200-178199000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:178197200-178200000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr2:178197200-178200000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr2:178197200-178200600 Weak transcription Primary hematopoietic stem cells blood
21 chr2:178197200-178200600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:178197200-178201200 Weak transcription Fetal Thymus thymus
23 chr2:178197200-178202600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:178197200-178202600 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr2:178197200-178202600 Weak transcription NHEK skin
26 chr2:178197200-178202800 Weak transcription Adipose Nuclei Adipose
27 chr2:178197200-178202800 Weak transcription GM12878-XiMat blood
28 chr2:178197200-178203200 Weak transcription Primary monocytes fromperipheralblood blood
29 chr2:178197200-178204800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr2:178197200-178211800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr2:178197200-178211800 Weak transcription Brain Hippocampus Middle brain
32 chr2:178197200-178212000 Weak transcription Brain Cingulate Gyrus brain
33 chr2:178197200-178213400 Weak transcription Rectal Smooth Muscle rectum
34 chr2:178197200-178215000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr2:178197200-178216800 Weak transcription Primary T cells from cord blood blood
36 chr2:178197200-178217600 Weak transcription Primary B cells from cord blood blood
37 chr2:178197600-178199200 Weak transcription Brain Angular Gyrus brain
38 chr2:178197600-178200000 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr2:178197600-178200000 Weak transcription Brain Inferior Temporal Lobe brain
40 chr2:178197600-178200600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr2:178197600-178202000 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:178197600-178202200 Weak transcription Stomach Mucosa stomach
43 chr2:178197600-178202600 Weak transcription NH-A brain
44 chr2:178197600-178202800 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:178197600-178211200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr2:178197600-178217200 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr2:178197800-178199000 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr2:178197800-178199200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr2:178197800-178199200 Strong transcription K562 blood
50 chr2:178197800-178200000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015