Variant report

Variant rs11910493
Chromosome Location chr21:48075607-48075608
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48056200-48081400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr21:48059800-48079200 Strong transcription Osteobl bone
3 chr21:48060200-48085800 Strong transcription Placenta Placenta
4 chr21:48060800-48077200 Strong transcription Fetal Thymus thymus
5 chr21:48060800-48077200 Strong transcription Stomach Smooth Muscle stomach
6 chr21:48061000-48079200 Strong transcription Duodenum Mucosa Duodenum
7 chr21:48061000-48079400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr21:48061000-48079400 Strong transcription Brain Anterior Caudate brain
9 chr21:48061000-48079400 Strong transcription Placenta Amnion Placenta Amnion
10 chr21:48061800-48077600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr21:48062000-48079000 Strong transcription HSMMtube muscle
12 chr21:48062000-48079200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr21:48062200-48079200 Strong transcription Muscle Satellite Cultured Cells --
14 chr21:48063000-48080800 Strong transcription Ovary ovary
15 chr21:48063200-48076600 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr21:48063400-48079400 Strong transcription NH-A brain
17 chr21:48063400-48079600 Strong transcription Skeletal Muscle Female skeletal muscle
18 chr21:48063400-48080800 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr21:48063800-48081400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr21:48066000-48079400 Strong transcription HSMM muscle
21 chr21:48068000-48075800 Strong transcription H1 Cell Line embryonic stem cell
22 chr21:48068200-48077400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr21:48069600-48081400 Weak transcription Psoas Muscle Psoas
24 chr21:48070600-48079000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
25 chr21:48070600-48086800 Weak transcription Fetal Heart heart
26 chr21:48070800-48076200 Strong transcription Brain Cingulate Gyrus brain
27 chr21:48071000-48079200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr21:48071000-48080800 Strong transcription Brain Hippocampus Middle brain
29 chr21:48071000-48081600 Weak transcription Right Atrium heart
30 chr21:48071200-48079600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr21:48071800-48079400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr21:48072000-48080400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr21:48072000-48081400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr21:48072000-48081400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr21:48072200-48077400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr21:48072400-48076000 ZNF genes & repeats GM12878-XiMat blood
37 chr21:48072800-48076000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
38 chr21:48072800-48076200 ZNF genes & repeats Primary hematopoietic stem cells blood
39 chr21:48072800-48077200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr21:48072800-48077200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr21:48073000-48076000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
42 chr21:48073000-48077000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr21:48073000-48077600 Strong transcription Fetal Brain Male brain
44 chr21:48073200-48076000 ZNF genes & repeats Dnd41 blood
45 chr21:48073200-48076200 ZNF genes & repeats Fetal Lung lung
46 chr21:48073200-48077200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr21:48073400-48076000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
48 chr21:48073400-48076200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
49 chr21:48073400-48076600 ZNF genes & repeats Primary B cells from cord blood blood
50 chr21:48073600-48076000 Weak transcription Brain Inferior Temporal Lobe brain

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