Variant report

Variant rs59699890
Chromosome Location chr21:48003272-48003273
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47991400-48005600 Weak transcription Psoas Muscle Psoas
2 chr21:47993000-48005200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr21:47993200-48004200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr21:47993400-48005000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr21:47993400-48006600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr21:47998400-48003800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr21:47998400-48004000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr21:47999000-48006000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr21:47999200-48003400 Weak transcription Fetal Intestine Large intestine
10 chr21:47999800-48005400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr21:48000200-48003800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr21:48000600-48005400 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr21:48001200-48003800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr21:48001200-48004000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr21:48001400-48003400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
16 chr21:48001400-48003800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr21:48001600-48004000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr21:48001800-48005400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr21:48002200-48003400 Weak transcription Thymus Thymus
20 chr21:48002200-48003800 Weak transcription Stomach Smooth Muscle stomach
21 chr21:48002200-48005400 Weak transcription Primary T cells fromperipheralblood blood
22 chr21:48002400-48003400 Weak transcription Brain Substantia Nigra brain
23 chr21:48002400-48003800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr21:48002400-48005200 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr21:48002600-48003600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr21:48002600-48003600 Weak transcription Gastric stomach
27 chr21:48002600-48003600 Weak transcription Left Ventricle heart
28 chr21:48002600-48004000 Weak transcription Colon Smooth Muscle Colon
29 chr21:48002600-48004200 Weak transcription Right Ventricle heart
30 chr21:48002600-48004200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr21:48002600-48004400 Weak transcription Brain Angular Gyrus brain
32 chr21:48002600-48004400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr21:48002600-48004600 Weak transcription Brain Hippocampus Middle brain
34 chr21:48002600-48005000 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr21:48002600-48005400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr21:48002600-48005600 Weak transcription Brain Anterior Caudate brain
37 chr21:48002600-48014400 Weak transcription Brain Cingulate Gyrus brain
38 chr21:48002800-48003400 Strong transcription HSMM muscle
39 chr21:48002800-48003800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr21:48002800-48004800 Weak transcription HMEC breast
41 chr21:48002800-48005000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr21:48002800-48005200 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr21:48002800-48007400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr21:48003000-48005000 Weak transcription NH-A brain

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