Variant report

Variant	rs11918924
Chromosome Location	chr3:94649444-94649445
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1374902	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs300302	1.00[AMR][1000 genomes]
rs4274746	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4337639	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4510376	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4588362	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4642127	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4857472	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7610104	1.00[AMR][1000 genomes]
rs7610499	1.00[AMR][1000 genomes]
rs9826923	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460764	chr3:94479849-94654181	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv590989	chr3:94479849-94654181	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2443975	chr3:94646823-94651269	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
4	esv3366874	chr3:94647912-94650035	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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