Variant report

Variant	rs11923237
Chromosome Location	chr3:100272136-100272137
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:100182801..100185010-chr3:100271226..100272925,2	K562	blood:

rs_ID	r²[population]
rs11923322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72917805	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72917810	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72945208	1.00[AMR][1000 genomes]
rs9811273	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9839721	1.00[AMR][1000 genomes]
rs9847864	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100241000-100299800	Weak transcription	Fetal Muscle Leg	muscle
2	chr3:100253800-100289000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr3:100253800-100289000	Weak transcription	Aorta	Aorta
4	chr3:100255000-100274800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr3:100261800-100277000	Weak transcription	Fetal Lung	lung
6	chr3:100265800-100300600	Weak transcription	HepG2	liver
7	chr3:100267200-100275200	Weak transcription	HSMM	muscle
8	chr3:100267600-100275400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr3:100267800-100275000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr3:100267800-100275800	Weak transcription	HSMMtube	muscle
11	chr3:100268400-100275400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr3:100268400-100282200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr3:100268600-100275200	Weak transcription	HMEC	breast
14	chr3:100268600-100277400	Weak transcription	Fetal Stomach	stomach
15	chr3:100269800-100275200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr3:100269800-100275200	Weak transcription	NHDF-Ad	bronchial
17	chr3:100269800-100275200	Weak transcription	NHEK	skin
18	chr3:100270200-100275200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr3:100270200-100275600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr3:100270400-100275000	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr3:100270400-100275200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr3:100270600-100275400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr3:100270800-100291000	Weak transcription	Colon Smooth Muscle	Colon
24	chr3:100271400-100272400	Weak transcription	Hela-S3	cervix
25	chr3:100271800-100274800	Enhancers	Liver	Liver

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