The 2.0 version of rSNPBase

Variant report

Variant rs72945208
Chromosome Location chr3:100238401-100238402
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100227200-100239400 Weak transcription Ovary ovary
2 chr3:100227400-100239400 Weak transcription Aorta Aorta
3 chr3:100227400-100239400 Weak transcription Fetal Stomach stomach
4 chr3:100235200-100242000 Enhancers Primary neutrophils fromperipheralblood blood
5 chr3:100235800-100244800 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:100236200-100238600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr3:100236400-100242600 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr3:100236800-100238800 Enhancers Placenta Amnion Placenta Amnion
9 chr3:100237000-100240600 Weak transcription GM12878-XiMat blood
10 chr3:100237200-100239000 Weak transcription Fetal Muscle Leg muscle
11 chr3:100237200-100240600 Enhancers Monocytes-CD14+_RO01746 blood
12 chr3:100237400-100238800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:100237400-100239000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr3:100237600-100238600 Enhancers Primary monocytes fromperipheralblood blood
15 chr3:100237600-100238600 Enhancers Osteobl bone
16 chr3:100237600-100238800 Enhancers HMEC breast
17 chr3:100237600-100239200 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr3:100237600-100239400 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr3:100237600-100241600 Weak transcription HepG2 liver
20 chr3:100237600-100244200 Weak transcription NH-A brain
21 chr3:100237800-100238600 Enhancers NHEK skin
22 chr3:100237800-100239400 Weak transcription Stomach Smooth Muscle stomach
23 chr3:100238000-100244400 Weak transcription Adipose Nuclei Adipose
24 chr3:100238000-100244400 Weak transcription Rectal Smooth Muscle rectum
25 chr3:100238000-100252600 Weak transcription Fetal Intestine Small intestine
26 chr3:100238000-100265400 Weak transcription HSMMtube muscle
27 chr3:100238200-100238800 Strong transcription Fetal Lung lung
28 chr3:100238200-100238800 Enhancers K562 blood
29 chr3:100238200-100239000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:100238200-100239400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr3:100238200-100239400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr3:100238200-100240400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr3:100238200-100240600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr3:100238200-100244400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr3:100238200-100244400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr3:100238200-100244400 Weak transcription HSMM muscle
37 chr3:100238400-100238600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:100238400-100239600 Weak transcription Liver Liver
39 chr3:100238400-100240400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:100238400-100244200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015