The 2.0 version of rSNPBase

Variant report

Variant rs11928364
Chromosome Location chr3:111264645-111264646
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111258600-111265200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:111258600-111266800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr3:111258800-111266600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr3:111260200-111269800 Enhancers Primary hematopoietic stem cells blood
5 chr3:111261200-111266400 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr3:111261200-111266800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:111261400-111266000 Weak transcription GM12878-XiMat blood
8 chr3:111261800-111265400 Weak transcription Primary B cells from cord blood blood
9 chr3:111261800-111266800 Weak transcription Small Intestine intestine
10 chr3:111262600-111268400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
11 chr3:111262600-111269400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
12 chr3:111263200-111265000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
13 chr3:111263200-111266200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr3:111263200-111266800 Enhancers Primary mononuclear cells fromperipheralblood Blood
15 chr3:111263200-111269000 Transcr. at gene 5' and 3' Dnd41 blood
16 chr3:111263200-111269200 Flanking Active TSS Primary T cells from cord blood blood
17 chr3:111263400-111266000 Weak transcription Duodenum Mucosa Duodenum
18 chr3:111263400-111266200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr3:111263600-111265600 Genic enhancers Fetal Thymus thymus
20 chr3:111263600-111266200 Enhancers Thymus Thymus
21 chr3:111263800-111265000 Genic enhancers Primary B cells from peripheral blood blood
22 chr3:111263800-111265800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
23 chr3:111263800-111266200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:111264000-111264800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
25 chr3:111264000-111264800 Enhancers Fetal Intestine Small intestine
26 chr3:111264000-111266400 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr3:111264200-111265000 Genic enhancers Primary T helper cells fromperipheralblood blood
28 chr3:111264200-111266800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:111264200-111268800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:111264400-111265000 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
31 chr3:111264400-111265200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:111264400-111268000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
33 chr3:111264600-111265400 Genic enhancers Primary T cells fromperipheralblood blood
34 chr3:111264600-111265400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
35 chr3:111264600-111266600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
36 chr3:111264600-111267400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
37 chr3:111264600-111268400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015