The 2.0 version of rSNPBase

Variant report

Variant rs11928736
Chromosome Location chr3:159565409-159565410
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:159556000-159566200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr3:159558000-159568800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr3:159558000-159570800 Weak transcription Pancreas Pancrea
4 chr3:159558000-159575000 Weak transcription Gastric stomach
5 chr3:159558200-159565800 Weak transcription Spleen Spleen
6 chr3:159558600-159566000 Weak transcription Right Atrium heart
7 chr3:159558800-159570600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr3:159559000-159569400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr3:159559000-159570600 Weak transcription Fetal Muscle Trunk muscle
10 chr3:159560400-159569200 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr3:159560600-159568400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:159561000-159565800 Enhancers Primary hematopoietic stem cells blood
13 chr3:159561000-159567400 Enhancers Brain Substantia Nigra brain
14 chr3:159561600-159566200 Enhancers HSMMtube muscle
15 chr3:159561800-159570400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr3:159561800-159570400 Enhancers Colon Smooth Muscle Colon
17 chr3:159562200-159567200 Enhancers Brain Inferior Temporal Lobe brain
18 chr3:159562400-159570400 Enhancers Brain Cingulate Gyrus brain
19 chr3:159562600-159569400 Enhancers Brain Angular Gyrus brain
20 chr3:159562800-159566200 Enhancers HSMM muscle
21 chr3:159562800-159570000 Weak transcription Adipose Nuclei Adipose
22 chr3:159563000-159566200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr3:159563000-159567200 Weak transcription Fetal Stomach stomach
24 chr3:159563000-159567200 Weak transcription Psoas Muscle Psoas
25 chr3:159563000-159567600 Enhancers Brain Hippocampus Middle brain
26 chr3:159563000-159569000 Weak transcription Fetal Brain Male brain
27 chr3:159563000-159569600 Weak transcription Small Intestine intestine
28 chr3:159563000-159570600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr3:159563200-159569400 Enhancers Brain Anterior Caudate brain
30 chr3:159563400-159566000 Weak transcription Lung lung
31 chr3:159563800-159567200 Weak transcription Right Ventricle heart
32 chr3:159563800-159567400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr3:159563800-159568400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr3:159563800-159569200 Weak transcription NH-A brain
35 chr3:159563800-159569400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr3:159563800-159570400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr3:159563800-159570400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:159563800-159570400 Weak transcription Aorta Aorta
39 chr3:159563800-159570800 Weak transcription Esophagus oesophagus
40 chr3:159564000-159565800 Weak transcription Fetal Heart heart
41 chr3:159564000-159566000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr3:159564000-159566000 Enhancers Pancreatic Islets Pancreatic Islet
43 chr3:159564000-159568400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:159564000-159569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr3:159564000-159569800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr3:159564200-159565800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr3:159564200-159569000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr3:159564200-159569400 Weak transcription Fetal Brain Female brain
49 chr3:159564400-159568600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr3:159564400-159569000 Weak transcription Liver Liver

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Last update: Aug 31, 2015