Variant report

Variant	rs11930131
Chromosome Location	chr4:158912398-158912399
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11936237	1.00[YRI][hapmap]
rs17037047	1.00[ASW][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv993476	chr4:158550643-159202015	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv1030124	chr4:158758675-159251140	Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv881288	chr4:158891733-159028080	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:158905200-158912800	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr4:158910200-158913000	Weak transcription	Primary hematopoietic stem cells	blood
3	chr4:158910200-158913000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr4:158910200-158913000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr4:158910400-158912800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr4:158910800-158913000	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr4:158912000-158913000	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr4:158912000-158913400	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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