Variant report

Variant	rs11939791
Chromosome Location	chr4:125661724-125661725
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10008933	0.93[ASN][1000 genomes]
rs10023970	0.93[ASN][1000 genomes]
rs11728020	0.91[ASN][1000 genomes]
rs1498015	0.93[ASN][1000 genomes]
rs1498016	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1498020	1.00[JPT][hapmap];0.95[YRI][hapmap];0.89[ASN][1000 genomes]
rs17178850	0.93[ASN][1000 genomes]
rs28495672	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4833305	1.00[CEU][hapmap];0.94[CHB][hapmap];0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7679415	0.93[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125661000-125661800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr4:125661200-125663000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr4:125661600-125662200	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr4:125661600-125662200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr4:125661600-125662200	Enhancers	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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