Variant report

Variant rs11955882
Chromosome Location chr5:115833127-115833128
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115791600-115838000 Weak transcription Right Ventricle heart
2 chr5:115796000-115833400 Strong transcription HUES64 Cell Line embryonic stem cell
3 chr5:115797000-115834800 Strong transcription H1 Cell Line embryonic stem cell
4 chr5:115797000-115838400 Strong transcription Placenta Placenta
5 chr5:115797400-115833800 Strong transcription iPS-18 Cell Line embryonic stem cell
6 chr5:115797600-115834600 Strong transcription H9 Cell Line embryonic stem cell
7 chr5:115797800-115834800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr5:115798000-115833200 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr5:115798000-115834600 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr5:115803400-115833200 Strong transcription iPS-15b Cell Line embryonic stem cell
11 chr5:115813800-115833600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr5:115813800-115851000 Weak transcription Liver Liver
13 chr5:115814000-115850200 Weak transcription Small Intestine intestine
14 chr5:115816000-115838400 Weak transcription Spleen Spleen
15 chr5:115816800-115840000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr5:115818600-115833200 Weak transcription Fetal Brain Male brain
17 chr5:115821400-115833400 Strong transcription Rectal Mucosa Donor 29 rectum
18 chr5:115823000-115842600 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr5:115824000-115833600 Weak transcription Ovary ovary
20 chr5:115825600-115833200 Strong transcription ES-I3 Cell Line embryonic stem cell
21 chr5:115828200-115865400 Weak transcription Primary T cells from cord blood blood
22 chr5:115828600-115833600 Strong transcription ES-WA7 Cell Line embryonic stem cell
23 chr5:115828800-115833400 Weak transcription Aorta Aorta
24 chr5:115828800-115833600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr5:115828800-115837800 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr5:115828800-115838000 Weak transcription Psoas Muscle Psoas
27 chr5:115829000-115837800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr5:115830600-115833200 Weak transcription Brain Anterior Caudate brain
29 chr5:115830600-115833400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr5:115830600-115845200 Weak transcription Pancreas Pancrea
31 chr5:115831000-115837800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr5:115831200-115833200 Weak transcription Brain Cingulate Gyrus brain
33 chr5:115831200-115837800 Weak transcription Rectal Smooth Muscle rectum
34 chr5:115831200-115851400 Weak transcription HepG2 liver
35 chr5:115831400-115837200 Weak transcription Adipose Nuclei Adipose
36 chr5:115831400-115838000 Weak transcription Colon Smooth Muscle Colon
37 chr5:115831400-115851800 Weak transcription Primary hematopoietic stem cells blood
38 chr5:115831600-115833200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr5:115831600-115842600 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr5:115831800-115833200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr5:115831800-115833400 Weak transcription Fetal Kidney kidney
42 chr5:115831800-115833400 Weak transcription Fetal Lung lung
43 chr5:115831800-115833600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr5:115831800-115833600 Weak transcription Fetal Brain Female brain
45 chr5:115831800-115833600 Weak transcription Fetal Intestine Small intestine
46 chr5:115831800-115834400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr5:115831800-115834400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr5:115831800-115837400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr5:115831800-115837400 Weak transcription Fetal Stomach stomach
50 chr5:115831800-115837800 Weak transcription Left Ventricle heart

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