Variant report

Variant rs1197672
Chromosome Location chr15:42103822-42103823
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42070200-42109800 Weak transcription Fetal Brain Male brain
2 chr15:42083600-42104600 Weak transcription Liver Liver
3 chr15:42083600-42109200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:42083800-42104400 Weak transcription Colonic Mucosa Colon
5 chr15:42083800-42105000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:42083800-42119400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr15:42089400-42114800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr15:42090000-42109800 Weak transcription Small Intestine intestine
9 chr15:42091400-42105400 Weak transcription HSMMtube muscle
10 chr15:42092200-42109400 Weak transcription HepG2 liver
11 chr15:42093200-42104800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr15:42093400-42104000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr15:42093600-42104200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr15:42093600-42104200 Weak transcription Dnd41 blood
15 chr15:42093600-42105200 Weak transcription Brain Germinal Matrix brain
16 chr15:42094200-42104400 Weak transcription Fetal Lung lung
17 chr15:42094200-42104600 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr15:42094600-42104400 Weak transcription Fetal Brain Female brain
19 chr15:42095200-42104400 Weak transcription GM12878-XiMat blood
20 chr15:42097000-42104200 Weak transcription Aorta Aorta
21 chr15:42097000-42104800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr15:42097200-42111000 Weak transcription Fetal Kidney kidney
23 chr15:42097600-42104200 Weak transcription Thymus Thymus
24 chr15:42097600-42104400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr15:42097600-42107800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:42097800-42119600 Weak transcription Psoas Muscle Psoas
27 chr15:42098200-42104200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr15:42098200-42118800 Strong transcription Fetal Stomach stomach
29 chr15:42098800-42115600 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr15:42099000-42104200 Weak transcription Lung lung
31 chr15:42099000-42104600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr15:42099000-42104800 Weak transcription Pancreas Pancrea
33 chr15:42099000-42104800 Weak transcription Rectal Smooth Muscle rectum
34 chr15:42099000-42110000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr15:42099000-42110000 Weak transcription Stomach Mucosa stomach
36 chr15:42099200-42104200 Weak transcription Right Ventricle heart
37 chr15:42099200-42104600 Weak transcription Left Ventricle heart
38 chr15:42099200-42110000 Weak transcription H1 Cell Line embryonic stem cell
39 chr15:42099200-42112000 Weak transcription A549 lung
40 chr15:42099800-42104200 Weak transcription Duodenum Mucosa Duodenum
41 chr15:42100200-42113200 Strong transcription Fetal Intestine Small intestine
42 chr15:42100800-42118800 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr15:42101000-42104200 Genic enhancers Breast Myoepithelial Primary Cells Breast
44 chr15:42101400-42104200 Enhancers Primary hematopoietic stem cells blood
45 chr15:42101600-42104400 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr15:42101800-42104000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
47 chr15:42101800-42104000 Weak transcription Osteobl bone
48 chr15:42101800-42104200 Weak transcription NH-A brain
49 chr15:42101800-42104400 Enhancers Primary T cells fromperipheralblood blood
50 chr15:42101800-42104800 Weak transcription Primary monocytes fromperipheralblood blood

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