Variant report

Variant rs1197901
Chromosome Location chr6:64238646-64238647
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:64237000-64240600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:64237400-64238800 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr6:64237600-64238800 Enhancers GM12878-XiMat blood
4 chr6:64237600-64238800 Flanking Active TSS Hela-S3 cervix
5 chr6:64237600-64240400 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr6:64237800-64238800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:64237800-64238800 Enhancers Pancreas Pancrea
8 chr6:64237800-64239600 Enhancers Placenta Amnion Placenta Amnion
9 chr6:64238000-64239200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr6:64238200-64239200 Weak transcription Fetal Intestine Small intestine
11 chr6:64238200-64239200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:64238200-64239400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr6:64238200-64239400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:64238200-64239400 Weak transcription Liver Liver
15 chr6:64238200-64239400 Enhancers HMEC breast
16 chr6:64238400-64239200 Enhancers A549 lung
17 chr6:64238400-64239400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:64238400-64239400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr6:64238400-64239400 Weak transcription Stomach Mucosa stomach
20 chr6:64238400-64239400 Weak transcription NHLF lung
21 chr6:64238400-64239400 Weak transcription Osteobl bone
22 chr6:64238400-64239600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:64238400-64239600 Weak transcription Small Intestine intestine
24 chr6:64238400-64240200 Enhancers Pancreatic Islets Pancreatic Islet
25 chr6:64238400-64241000 Genic enhancers HepG2 liver
26 chr6:64238600-64239000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr6:64238600-64239200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:64238600-64239200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr6:64238600-64239200 Enhancers NHEK skin

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