The 2.0 version of rSNPBase

Variant report

Variant rs11983488
Chromosome Location chr7:129317836-129317837
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129283800-129331600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr7:129290000-129325800 Weak transcription Stomach Mucosa stomach
3 chr7:129297800-129349800 Weak transcription Small Intestine intestine
4 chr7:129301000-129330200 Weak transcription Gastric stomach
5 chr7:129302000-129331800 Weak transcription Esophagus oesophagus
6 chr7:129305000-129338200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr7:129307200-129352000 Weak transcription NHLF lung
8 chr7:129310600-129319200 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr7:129311000-129319400 Strong transcription Primary B cells from peripheral blood blood
10 chr7:129311200-129318000 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr7:129311200-129319000 Strong transcription Primary T helper naive cells fromperipheralblood blood
12 chr7:129311200-129319000 Strong transcription Rectal Mucosa Donor 29 rectum
13 chr7:129311200-129322600 Strong transcription Fetal Thymus thymus
14 chr7:129311400-129323800 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr7:129311400-129352200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr7:129311600-129318600 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr7:129311600-129319400 Strong transcription Primary T cells fromperipheralblood blood
18 chr7:129312400-129319200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr7:129313000-129330200 Weak transcription Muscle Satellite Cultured Cells --
20 chr7:129313200-129320400 Weak transcription HMEC breast
21 chr7:129313200-129321400 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr7:129314200-129319200 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr7:129314400-129318800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr7:129314400-129330200 Weak transcription Right Ventricle heart
25 chr7:129314600-129318200 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr7:129314600-129329800 Weak transcription Spleen Spleen
27 chr7:129314800-129321200 Strong transcription Primary monocytes fromperipheralblood blood
28 chr7:129314800-129330200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr7:129314800-129351200 Weak transcription Pancreas Pancrea
30 chr7:129315000-129331400 Weak transcription Colonic Mucosa Colon
31 chr7:129315200-129329200 Weak transcription NHEK skin
32 chr7:129315200-129330200 Weak transcription Brain Angular Gyrus brain
33 chr7:129315200-129330200 Weak transcription Rectal Smooth Muscle rectum
34 chr7:129315200-129341800 Weak transcription NH-A brain
35 chr7:129315400-129318400 Strong transcription Primary T killer memory cells from peripheral blood blood
36 chr7:129315400-129319200 Strong transcription Primary T cells from cord blood blood
37 chr7:129315400-129331600 Weak transcription HSMM muscle
38 chr7:129315400-129357000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr7:129315600-129321400 Strong transcription Dnd41 blood
40 chr7:129315600-129324600 Weak transcription HUVEC blood vessel
41 chr7:129315600-129330200 Weak transcription Osteobl bone
42 chr7:129315600-129331600 Weak transcription Brain Anterior Caudate brain
43 chr7:129315600-129331600 Weak transcription HSMMtube muscle
44 chr7:129315600-129373600 Weak transcription Psoas Muscle Psoas
45 chr7:129315800-129324600 Weak transcription Brain Substantia Nigra brain
46 chr7:129316000-129319000 Strong transcription Primary B cells from cord blood blood
47 chr7:129316000-129319200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr7:129316000-129320000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr7:129316000-129320400 Weak transcription Fetal Kidney kidney
50 chr7:129316000-129324600 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015