The 2.0 version of rSNPBase

Variant report

Variant rs11988460
Chromosome Location chr8:110568420-110568421
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:110553000-110569800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr8:110553000-110569800 Weak transcription Placenta Amnion Placenta Amnion
3 chr8:110553000-110570000 Weak transcription Lung lung
4 chr8:110553000-110571800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr8:110553000-110587000 Weak transcription Esophagus oesophagus
6 chr8:110553400-110569800 Weak transcription Osteobl bone
7 chr8:110553800-110569600 Weak transcription Fetal Kidney kidney
8 chr8:110553800-110569800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr8:110553800-110613000 Weak transcription NHLF lung
10 chr8:110554000-110569400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr8:110554000-110569600 Weak transcription Fetal Brain Female brain
12 chr8:110554000-110569800 Weak transcription Brain Cingulate Gyrus brain
13 chr8:110554000-110569800 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr8:110554000-110569800 Weak transcription Fetal Brain Male brain
15 chr8:110554000-110569800 Weak transcription Left Ventricle heart
16 chr8:110554000-110569800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr8:110554000-110569800 Weak transcription Small Intestine intestine
18 chr8:110554000-110569800 Weak transcription Thymus Thymus
19 chr8:110554000-110570000 Weak transcription Fetal Stomach stomach
20 chr8:110554000-110570000 Weak transcription Right Ventricle heart
21 chr8:110554000-110571400 Weak transcription Fetal Intestine Small intestine
22 chr8:110554000-110571400 Weak transcription Pancreas Pancrea
23 chr8:110554000-110583000 Weak transcription HMEC breast
24 chr8:110554000-110589200 Weak transcription Psoas Muscle Psoas
25 chr8:110554200-110569800 Weak transcription Fetal Muscle Leg muscle
26 chr8:110554200-110569800 Weak transcription HSMMtube muscle
27 chr8:110554200-110576000 Weak transcription Brain Substantia Nigra brain
28 chr8:110554600-110569200 Weak transcription Fetal Heart heart
29 chr8:110554600-110569800 Weak transcription Rectal Smooth Muscle rectum
30 chr8:110555200-110568600 Weak transcription HepG2 liver
31 chr8:110555200-110579200 Weak transcription Brain Angular Gyrus brain
32 chr8:110558600-110569400 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr8:110558800-110587800 Weak transcription Stomach Mucosa stomach
34 chr8:110562000-110569200 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr8:110562200-110569800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr8:110562200-110570000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr8:110562400-110569800 Weak transcription HUVEC blood vessel
38 chr8:110562800-110569800 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr8:110562800-110577400 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr8:110563000-110578000 Strong transcription Primary T cells fromperipheralblood blood
41 chr8:110563000-110580000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr8:110563000-110586800 Weak transcription Spleen Spleen
43 chr8:110563200-110577800 Strong transcription Dnd41 blood
44 chr8:110563600-110577600 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr8:110563600-110580400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr8:110564000-110569200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr8:110564200-110569200 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr8:110564200-110577400 Strong transcription Primary B cells from cord blood blood
49 chr8:110564400-110587200 Weak transcription Colonic Mucosa Colon
50 chr8:110564600-110570600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015