Variant report

Variant	rs35039797
Chromosome Location	chr8:110587222-110587223
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:110585424..110587583-chr8:110589809..110591603,2	MCF-7	breast:
2	chr8:110582739..110585482-chr8:110585928..110589559,4	MCF-7	breast:
3	chr8:110585248..110587621-chr8:110594854..110596894,3	MCF-7	breast:
4	chr8:110585332..110587450-chr8:110606815..110608891,2	K562	blood:
5	chr8:110358079..110360287-chr8:110586276..110588279,2	K562	blood:
6	chr8:110586311..110588193-chr8:110645798..110647826,2	MCF-7	breast:
7	chr8:110586558..110591065-chr8:110591815..110595528,4	K562	blood:
8	chr8:110579303..110581510-chr8:110586051..110587818,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000147642	Chromatin interaction
ENSG00000252559	Chromatin interaction

rs_ID	r²[population]
rs11988460	1.00[EUR][1000 genomes]
rs73317041	0.86[AFR][1000 genomes]

Chromatin state (count:85 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110553800-110613000	Weak transcription	NHLF	lung
2	chr8:110554000-110589200	Weak transcription	Psoas Muscle	Psoas
3	chr8:110558800-110587800	Weak transcription	Stomach Mucosa	stomach
4	chr8:110567000-110593200	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr8:110570400-110593600	Weak transcription	Fetal Brain Male	brain
6	chr8:110571000-110589200	Weak transcription	Hela-S3	cervix
7	chr8:110571000-110589200	Weak transcription	NH-A	brain
8	chr8:110571600-110591200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:110571600-110592800	Weak transcription	Small Intestine	intestine
10	chr8:110572000-110589000	Weak transcription	Aorta	Aorta
11	chr8:110573200-110587800	Weak transcription	Colon Smooth Muscle	Colon
12	chr8:110576200-110590400	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr8:110577000-110589400	Weak transcription	K562	blood
14	chr8:110577400-110590800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr8:110579600-110590400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr8:110580000-110588800	Weak transcription	Primary T cells from cord blood	blood
17	chr8:110580000-110589400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr8:110580000-110589600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr8:110581400-110587600	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr8:110583200-110587600	Weak transcription	Right Atrium	heart
21	chr8:110583600-110587800	Weak transcription	Brain Cingulate Gyrus	brain
22	chr8:110583800-110590600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr8:110583800-110591600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr8:110583800-110601600	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr8:110584200-110589600	Weak transcription	HMEC	breast
26	chr8:110584600-110589400	Weak transcription	Pancreatic Islets	Pancreatic Islet
27	chr8:110584800-110587800	Weak transcription	HUVEC	blood vessel
28	chr8:110585000-110591200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr8:110585600-110587600	Strong transcription	Stomach Smooth Muscle	stomach
30	chr8:110585800-110587600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
31	chr8:110586000-110587800	Strong transcription	Brain Germinal Matrix	brain
32	chr8:110586000-110587800	Strong transcription	Duodenum Mucosa	Duodenum
33	chr8:110586000-110588000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr8:110586000-110588600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr8:110586000-110598800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr8:110586200-110587600	Strong transcription	Liver	Liver
37	chr8:110586600-110587400	Flanking Active TSS	Primary B cells from peripheral blood	blood
38	chr8:110586600-110587400	Enhancers	GM12878-XiMat	blood
39	chr8:110586600-110587600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr8:110586600-110587800	Strong transcription	Rectal Mucosa Donor 31	rectum
41	chr8:110586600-110588000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr8:110586600-110588000	Genic enhancers	Brain Dorsolateral Prefrontal Cortex	brain
43	chr8:110586600-110588600	Strong transcription	HepG2	liver
44	chr8:110586600-110590000	Enhancers	Fetal Lung	lung
45	chr8:110586600-110592400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr8:110586800-110587400	Strong transcription	Cortex derived primary cultured neurospheres	brain
47	chr8:110586800-110587400	Enhancers	Brain Anterior Caudate	brain
48	chr8:110586800-110587400	Strong transcription	Brain Hippocampus Middle	brain
49	chr8:110586800-110587400	Enhancers	HSMMtube	muscle
50	chr8:110586800-110587600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland

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