Variant report

Variant	rs11989376
Chromosome Location	chr8:106744261-106744262
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11990594	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11995327	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv831418	chr8:106648456-106833333	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv891260	chr8:106737459-106808078	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106741000-106744400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr8:106742400-106746200	Enhancers	Fetal Heart	heart
3	chr8:106742800-106760000	Weak transcription	Left Ventricle	heart
4	chr8:106743400-106744400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:106743400-106746200	Weak transcription	Fetal Brain Female	brain
6	chr8:106743400-106755600	Weak transcription	Right Ventricle	heart
7	chr8:106743600-106744400	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr8:106743600-106768400	Weak transcription	Psoas Muscle	Psoas
9	chr8:106743800-106744400	Enhancers	Adipose Nuclei	Adipose
10	chr8:106743800-106744400	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr8:106743800-106744400	Enhancers	HUVEC	blood vessel
12	chr8:106743800-106744800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr8:106743800-106745600	Enhancers	K562	blood
14	chr8:106743800-106745800	Weak transcription	Fetal Lung	lung
15	chr8:106743800-106746200	Weak transcription	Right Atrium	heart
16	chr8:106743800-106753200	Weak transcription	Aorta	Aorta
17	chr8:106743800-106755400	Weak transcription	Ovary	ovary
18	chr8:106743800-106756000	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr8:106744000-106744400	Enhancers	NHDF-Ad	bronchial
20	chr8:106744000-106744600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr8:106744000-106744800	Enhancers	NHLF	lung
22	chr8:106744000-106746800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr8:106744200-106745800	Weak transcription	Colon Smooth Muscle	Colon
24	chr8:106744200-106746000	Weak transcription	Rectal Smooth Muscle	rectum
25	chr8:106744200-106746000	Weak transcription	Stomach Smooth Muscle	stomach

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