Variant report

Variant rs11990629
Chromosome Location chr8:59942966-59942967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59929800-59945000 Weak transcription Fetal Stomach stomach
2 chr8:59931400-59945600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr8:59932000-59955600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr8:59933600-59950800 Weak transcription Muscle Satellite Cultured Cells --
5 chr8:59934000-59945800 Weak transcription Osteobl bone
6 chr8:59935200-59945800 Weak transcription H1 Cell Line embryonic stem cell
7 chr8:59936800-59944600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr8:59937400-59944000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr8:59938400-59944600 Weak transcription Primary hematopoietic stem cells blood
10 chr8:59938600-59945000 Weak transcription Thymus Thymus
11 chr8:59939800-59943800 Weak transcription Fetal Thymus thymus
12 chr8:59940400-59945800 Weak transcription Stomach Smooth Muscle stomach
13 chr8:59940600-59948400 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr8:59940800-59943400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr8:59941000-59943200 Enhancers Dnd41 blood
16 chr8:59941200-59943200 Enhancers HUES64 Cell Line embryonic stem cell
17 chr8:59941200-59943400 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr8:59941400-59944000 Enhancers Cortex derived primary cultured neurospheres brain
19 chr8:59941600-59944000 Enhancers Brain Germinal Matrix brain
20 chr8:59941800-59943200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr8:59941800-59943200 Enhancers HUES48 Cell Line embryonic stem cell
22 chr8:59942000-59943000 Enhancers Duodenum Mucosa Duodenum
23 chr8:59942000-59943200 Enhancers Primary T cells from cord blood blood
24 chr8:59942000-59943400 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr8:59942000-59943800 Enhancers Liver Liver
26 chr8:59942200-59943000 Weak transcription Fetal Heart heart
27 chr8:59942200-59943200 Weak transcription HUVEC blood vessel
28 chr8:59942200-59953400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr8:59942400-59943000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
30 chr8:59942400-59943400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr8:59942400-59946200 Weak transcription Small Intestine intestine
32 chr8:59942600-59943400 Enhancers Fetal Brain Male brain
33 chr8:59942600-59943800 Enhancers Colon Smooth Muscle Colon
34 chr8:59942600-59945600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr8:59942800-59943000 Active TSS Rectal Mucosa Donor 31 rectum
36 chr8:59942800-59943400 Active TSS Rectal Mucosa Donor 29 rectum
37 chr8:59942800-59943400 Enhancers A549 lung

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