Variant report

Variant rs55765016
Chromosome Location chr8:59953117-59953118
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59932000-59955600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr8:59942200-59953400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr8:59946200-59953200 Weak transcription Primary T cells fromperipheralblood blood
4 chr8:59946400-59953200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr8:59946400-59956400 Weak transcription Stomach Smooth Muscle stomach
6 chr8:59946600-59953200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr8:59946600-59962400 Weak transcription Fetal Stomach stomach
8 chr8:59946800-59953200 Weak transcription H1 Cell Line embryonic stem cell
9 chr8:59947000-59956000 Weak transcription Primary T cells from cord blood blood
10 chr8:59947200-59956200 Weak transcription Thymus Thymus
11 chr8:59947200-59958400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr8:59947400-59955600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr8:59947600-59953200 Weak transcription Fetal Thymus thymus
14 chr8:59947600-59956000 Weak transcription Primary hematopoietic stem cells blood
15 chr8:59948000-59953400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr8:59948600-59953800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr8:59948800-59953200 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr8:59948800-59953200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr8:59948800-59953200 Weak transcription NHDF-Ad bronchial
20 chr8:59949200-59971000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr8:59951000-59953400 Enhancers HUES6 Cell Line embryonic stem cell
22 chr8:59951200-59954200 Strong transcription Dnd41 blood
23 chr8:59951200-59956400 Weak transcription Colon Smooth Muscle Colon
24 chr8:59951200-59957800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr8:59951400-59953400 Weak transcription Fetal Intestine Small intestine
26 chr8:59951400-59955600 Weak transcription Osteobl bone
27 chr8:59951400-59960600 Weak transcription Muscle Satellite Cultured Cells --
28 chr8:59951600-59953200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr8:59951600-59956200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr8:59951800-59956200 Weak transcription Small Intestine intestine
31 chr8:59952000-59953200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr8:59952000-59954800 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr8:59952200-59953200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr8:59952200-59953400 Weak transcription Fetal Brain Male brain
35 chr8:59952400-59956200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr8:59952800-59953400 Enhancers HUES48 Cell Line embryonic stem cell
37 chr8:59952800-59953400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr8:59952800-59953600 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr8:59952800-59955600 Enhancers HUES64 Cell Line embryonic stem cell
40 chr8:59952800-59957000 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr8:59953000-59953200 Enhancers Brain Germinal Matrix brain
42 chr8:59953000-59953400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
43 chr8:59953000-59953400 Enhancers Placenta Placenta
44 chr8:59953000-59953600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr8:59953000-59953600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr8:59953000-59953600 Enhancers H9 Cell Line embryonic stem cell
47 chr8:59953000-59953800 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr8:59953000-59954000 Enhancers Gastric stomach
49 chr8:59953000-59954000 Enhancers Pancreas Pancrea
50 chr8:59953000-59954000 Enhancers Rectal Mucosa Donor 31 rectum

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