Variant report

Variant	rs11991096
Chromosome Location	chr8:91531026-91531027
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11985438	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991586	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16893331	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904658	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904669	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6997579	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7000048	1.00[AMR][1000 genomes]
rs7815421	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7815915	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7822308	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7823964	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981885	chr8:91528144-91537088	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91522000-91532400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:91530600-91532000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr8:91531000-91532800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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