Variant report

Variant	rs6997579
Chromosome Location	chr8:91542432-91542433
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11985438	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991096	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11998205	0.88[YRI][hapmap]
rs16893331	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904658	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904669	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2023625	1.00[ASW][hapmap];0.89[YRI][hapmap]
rs7000048	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7815421	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7815915	1.00[ASW][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7822308	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7823964	1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7829431	1.00[MEX][hapmap]
rs7829606	0.89[YRI][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91533800-91545800	Weak transcription	HSMMtube	muscle
2	chr8:91538200-91544000	Weak transcription	K562	blood
3	chr8:91542200-91543200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:91542400-91543000	Enhancers	HUVEC	blood vessel
5	chr8:91542400-91543200	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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