Variant report

Variant	rs11995387
Chromosome Location	chr8:114194464-114194465
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11987770	1.00[YRI][hapmap];0.93[AFR][1000 genomes]
rs11988898	1.00[YRI][hapmap]
rs11989169	0.85[YRI][hapmap]
rs11990737	0.83[YRI][hapmap]
rs11994389	1.00[YRI][hapmap]
rs11995029	1.00[YRI][hapmap]
rs11998403	1.00[YRI][hapmap]
rs1504348	1.00[YRI][hapmap]
rs55637339	0.87[AFR][1000 genomes]
rs56025622	0.87[AFR][1000 genomes]
rs57100485	0.87[AFR][1000 genomes]
rs57741560	0.87[AFR][1000 genomes]
rs60043040	0.93[AFR][1000 genomes]
rs73701333	0.93[AFR][1000 genomes]
rs73701334	0.93[AFR][1000 genomes]
rs73702268	0.93[AFR][1000 genomes]
rs73702272	0.93[AFR][1000 genomes]
rs73702284	0.87[AFR][1000 genomes]
rs73702285	0.87[AFR][1000 genomes]
rs73702286	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754581	chr8:114029421-114419106	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv831428	chr8:114102983-114320802	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv916637	chr8:114116303-114338450	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1035014	chr8:114180224-114261619	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1022803	chr8:114180224-114354093	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links