Variant report

Variant rs12006115
Chromosome Location chr9:6782941-6782942
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:6761800-6792800 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr9:6772000-6783400 Weak transcription Spleen Spleen
3 chr9:6772000-6788600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:6774200-6806200 Weak transcription Aorta Aorta
5 chr9:6775400-6785000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr9:6776200-6786200 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr9:6776200-6786600 Enhancers Primary T helper cells fromperipheralblood blood
8 chr9:6776400-6786200 Enhancers Primary B cells from peripheral blood blood
9 chr9:6777000-6783800 Enhancers Fetal Intestine Small intestine
10 chr9:6778800-6786200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr9:6779000-6789000 Enhancers Primary T helper cells PMA-I stimulated --
12 chr9:6779200-6783800 Enhancers Duodenum Mucosa Duodenum
13 chr9:6779200-6785400 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr9:6779400-6783600 Enhancers Brain Substantia Nigra brain
15 chr9:6779400-6784000 Enhancers Brain Inferior Temporal Lobe brain
16 chr9:6779400-6786000 Enhancers Brain Hippocampus Middle brain
17 chr9:6779400-6786200 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr9:6779600-6783800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr9:6779600-6787000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr9:6779600-6787400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr9:6779800-6787400 Weak transcription Esophagus oesophagus
22 chr9:6779800-6787600 Weak transcription NHLF lung
23 chr9:6779800-6788600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr9:6779800-6792800 Weak transcription Ovary ovary
25 chr9:6780000-6783200 Enhancers Stomach Mucosa stomach
26 chr9:6780000-6785000 Weak transcription Liver Liver
27 chr9:6780000-6785600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr9:6780200-6784600 Weak transcription NHEK skin
29 chr9:6780200-6786000 Enhancers Primary T cells fromperipheralblood blood
30 chr9:6780200-6787400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr9:6780200-6787400 Weak transcription Colonic Mucosa Colon
32 chr9:6780200-6787600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr9:6780400-6783000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr9:6780400-6783800 Enhancers Left Ventricle heart
35 chr9:6780600-6783600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr9:6780600-6783800 Enhancers Psoas Muscle Psoas
37 chr9:6780600-6784000 Enhancers Brain Cingulate Gyrus brain
38 chr9:6780600-6785600 Weak transcription A549 lung
39 chr9:6780600-6787600 Weak transcription Rectal Smooth Muscle rectum
40 chr9:6781000-6783800 Enhancers Right Ventricle heart
41 chr9:6781000-6787200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr9:6781000-6787200 Weak transcription HUVEC blood vessel
43 chr9:6781200-6783200 Weak transcription H1 Cell Line embryonic stem cell
44 chr9:6781200-6783600 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr9:6781200-6784600 Weak transcription K562 blood
46 chr9:6781200-6785800 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr9:6781200-6786000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr9:6781200-6787400 Weak transcription Osteobl bone
49 chr9:6781200-6787600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr9:6781200-6787600 Weak transcription Duodenum Smooth Muscle Duodenum

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