Variant report

Variant	rs7873674
Chromosome Location	chr9:6756635-6756636
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	YY1	chr9:6756568-6756795	K562	blood:	n/a	n/a
2	HEY1	chr9:6756547-6758372	HepG2	liver:	n/a	chr9:6758226-6758241
3	HCFC1	chr9:6756581-6759509	Hela-S3	cervix:	n/a	n/a
4	POLR2A	chr9:6756351-6759085	HepG2	liver:	n/a	n/a
5	MAX	chr9:6756628-6758535	HepG2	liver:	n/a	chr9:6758279-6758288 chr9:6757940-6757949 chr9:6757908-6757917 chr9:6758231-6758241 chr9:6757940-6757949 chr9:6757938-6757951 chr9:6757907-6757918 chr9:6757940-6757949
6	JUN	chr9:6756535-6759109	K562	blood:	n/a	chr9:6757913-6757922 chr9:6757365-6757375 chr9:6757366-6757374 chr9:6758422-6758436
7	POLR2A	chr9:6756572-6758414	GM12878	blood:	n/a	n/a
8	MTA3	chr9:6756621-6758399	GM12878	blood:	n/a	n/a
9	MXI1	chr9:6756525-6759904	SK-N-SH	brain:	n/a	chr9:6759313-6759328 chr9:6757909-6757918 chr9:6757939-6757948 chr9:6759311-6759326
10	POLR2A	chr9:6756515-6758700	K562	blood:	n/a	n/a
11	MAX	chr9:6756630-6758541	HCT-116	colon:	n/a	chr9:6758279-6758288 chr9:6757940-6757949 chr9:6757908-6757917 chr9:6758231-6758241 chr9:6757940-6757949 chr9:6757938-6757951 chr9:6757907-6757918 chr9:6757940-6757949
12	POLR2A	chr9:6756568-6758494	K562	blood:	n/a	n/a
13	POLR2A	chr9:6756561-6756849	HepG2	liver:	n/a	n/a
14	POLR2A	chr9:6756540-6759426	GM12878	blood:	n/a	n/a
15	POLR2A	chr9:6756371-6759431	HepG2	liver:	n/a	n/a
16	YY1	chr9:6756421-6756796	K562	blood:	n/a	n/a
17	POLR2A	chr9:6756617-6758283	K562	blood:	n/a	n/a
18	POLR2A	chr9:6756491-6759138	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:6668807..6671531-chr9:6755488..6757060,2	K562	blood:
2	chr9:6711589..6718151-chr9:6755774..6759657,12	MCF-7	breast:
3	chr9:6413251..6414875-chr9:6756450..6759044,2	K562	blood:
4	chr9:6749158..6750730-chr9:6754623..6757370,3	K562	blood:
5	chr9:6411580..6414419-chr9:6755713..6757647,2	K562	blood:
6	chr9:6747740..6749345-chr9:6756036..6758918,2	MCF-7	breast:
7	chr9:6722888..6726785-chr9:6754807..6757177,3	K562	blood:
8	chr9:6749197..6752825-chr9:6755235..6757236,4	K562	blood:
9	chr9:6714844..6717578-chr9:6754943..6759087,4	MCF-7	breast:
10	chr9:6751286..6753075-chr9:6755508..6757503,2	MCF-7	breast:

Variant related genes	Relation type
KDM4C	TF binding region
ENSG00000231381	Chromatin interaction
ENSG00000225489	Chromatin interaction
ENSG00000147854	Chromatin interaction
ENSG00000256968	Chromatin interaction

Extended variants
information (count: 79 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs11999797	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12006115	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55842150	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55850670	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56357661	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57366002	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs57832575	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58293776	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59274888	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59844726	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7040293	0.84[EUR][1000 genomes]
rs7044198	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72699607	0.96[EUR][1000 genomes]
rs72699609	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72699614	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72699615	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72699616	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72699617	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72699622	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72699623	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72699628	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72699629	0.89[EUR][1000 genomes]
rs72699635	0.81[EUR][1000 genomes]
rs72699637	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72699640	0.87[EUR][1000 genomes]
rs72699644	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72699645	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72699647	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72699654	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72699655	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72699657	0.88[EUR][1000 genomes]
rs72699658	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72699660	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72699662	0.81[EUR][1000 genomes]
rs72699668	0.87[EUR][1000 genomes]
rs7872677	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:43 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv892162	chr9:6480005-6788085	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
2	esv2752308	chr9:6523060-6899149	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	73 gene(s)	inside rSNPs	diseases
3	nsv1028402	chr9:6542253-6874231	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	71 gene(s)	inside rSNPs	diseases
4	nsv1018308	chr9:6544766-6869653	Genic enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	71 gene(s)	inside rSNPs	diseases
5	nsv1015462	chr9:6544766-6874231	Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	71 gene(s)	inside rSNPs	diseases
6	nsv870402	chr9:6565246-7016784	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
7	nsv1033539	chr9:6566610-7022554	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
8	nsv466111	chr9:6567841-7017391	Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
9	nsv613208	chr9:6567841-7017391	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
10	nsv1029929	chr9:6573752-6852349	Weak transcription Strong transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
11	nsv539969	chr9:6573752-6852349	Bivalent/Poised TSS Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
12	nsv1024831	chr9:6573752-7018641	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	70 gene(s)	inside rSNPs	diseases
13	esv2758626	chr9:6576991-6838660	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
14	esv2759661	chr9:6576991-6845561	Flanking Active TSS Active TSS Strong transcription Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
15	nsv1031417	chr9:6584138-6823129	Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
16	nsv539970	chr9:6584138-6823129	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
17	nsv892166	chr9:6602821-7222495	Strong transcription Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
18	nsv1021933	chr9:6605417-6824468	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
19	nsv1018845	chr9:6609578-6829592	Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
20	nsv1021304	chr9:6630626-6767080	Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
21	nsv1033323	chr9:6630626-6824468	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
22	nsv892173	chr9:6669474-6760919	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
23	nsv466112	chr9:6669474-6786734	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
24	nsv613212	chr9:6669474-6786734	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
25	esv2752309	chr9:6670448-6908200	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	70 gene(s)	inside rSNPs	diseases
26	nsv892176	chr9:6672097-6760919	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
27	nsv982630	chr9:6672217-6796787	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
28	nsv892181	chr9:6680477-7070962	Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	70 gene(s)	inside rSNPs	diseases
29	nsv870332	chr9:6694842-6911550	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
30	nsv1021016	chr9:6701133-6770362	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
31	nsv1016109	chr9:6712314-6924843	Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
32	esv2761485	chr9:6715049-6775119	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
33	nsv613252	chr9:6715730-7022554	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
34	nsv1031757	chr9:6722102-6775107	Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
35	nsv831499	chr9:6723287-6930933	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
36	nsv1018557	chr9:6723728-6891136	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
37	nsv1017204	chr9:6731786-6775107	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
38	nsv1023906	chr9:6731786-7372132	Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
39	nsv892182	chr9:6739489-6811507	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
40	esv2757308	chr9:6743440-6845561	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
41	nsv1032676	chr9:6745551-6864365	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
42	nsv466115	chr9:6750556-6859189	Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
43	nsv613256	chr9:6750556-6859189	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:6751000-6756800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr9:6756000-6756800	Enhancers	Primary B cells from peripheral blood	blood
3	chr9:6756000-6760000	Active TSS	K562	blood
4	chr9:6756200-6756800	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr9:6756200-6756800	Flanking Active TSS	GM12878-XiMat	blood
6	chr9:6756400-6756800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr9:6756400-6756800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr9:6756400-6756800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr9:6756400-6756800	Enhancers	Fetal Thymus	thymus
10	chr9:6756400-6757000	Flanking Active TSS	Dnd41	blood
11	chr9:6756400-6757400	Active TSS	HepG2	liver
12	chr9:6756600-6756800	Enhancers	H1 Cell Line	embryonic stem cell
13	chr9:6756600-6756800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr9:6756600-6756800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr9:6756600-6756800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr9:6756600-6756800	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr9:6756600-6756800	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr9:6756600-6756800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr9:6756600-6756800	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr9:6756600-6756800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
21	chr9:6756600-6756800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
22	chr9:6756600-6756800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr9:6756600-6756800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
24	chr9:6756600-6756800	Enhancers	Adipose Nuclei	Adipose
25	chr9:6756600-6756800	Enhancers	Brain Anterior Caudate	brain
26	chr9:6756600-6756800	Enhancers	Brain Cingulate Gyrus	brain
27	chr9:6756600-6756800	Enhancers	Brain Inferior Temporal Lobe	brain
28	chr9:6756600-6756800	Enhancers	Brain Substantia Nigra	brain
29	chr9:6756600-6756800	Enhancers	Colonic Mucosa	Colon
30	chr9:6756600-6756800	Active TSS	Duodenum Mucosa	Duodenum
31	chr9:6756600-6756800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
32	chr9:6756600-6756800	Enhancers	Fetal Intestine Large	intestine
33	chr9:6756600-6756800	Enhancers	Fetal Intestine Small	intestine
34	chr9:6756600-6756800	Enhancers	Fetal Muscle Trunk	muscle
35	chr9:6756600-6756800	Enhancers	Fetal Muscle Leg	muscle
36	chr9:6756600-6756800	Enhancers	Psoas Muscle	Psoas
37	chr9:6756600-6756800	Flanking Active TSS	Rectal Smooth Muscle	rectum
38	chr9:6756600-6756800	Enhancers	Sigmoid Colon	Sigmoid Colon
39	chr9:6756600-6756800	Active TSS	Skeletal Muscle Female	skeletal muscle
40	chr9:6756600-6756800	Enhancers	Stomach Mucosa	stomach
41	chr9:6756600-6756800	Enhancers	Hela-S3	cervix
42	chr9:6756600-6756800	Enhancers	HUVEC	blood vessel
43	chr9:6756600-6756800	Enhancers	Osteobl	bone
44	chr9:6756600-6757000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr9:6756600-6757000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
46	chr9:6756600-6757000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
47	chr9:6756600-6757000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr9:6756600-6757000	Flanking Active TSS	Primary B cells from cord blood	blood
49	chr9:6756600-6757000	Flanking Active TSS	Primary T cells from cord blood	blood
50	chr9:6756600-6757000	Flanking Active TSS	Primary T cells fromperipheralblood	blood

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