Variant report

Variant	rs1204251
Chromosome Location	chr6:13877914-13877915
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:13819320..13820968-chr6:13875542..13878125,2	K562	blood:
2	chr6:13872400..13875696-chr6:13875999..13878968,3	MCF-7	breast:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1204190	0.86[EUR][1000 genomes]
rs1204198	0.88[EUR][1000 genomes]
rs1204199	0.88[EUR][1000 genomes]
rs1204200	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204201	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204203	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204204	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204206	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204212	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1204215	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204220	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204223	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204231	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1204245	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204247	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204248	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204249	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1204253	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204255	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204256	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204257	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204258	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204259	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204260	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204261	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1204262	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1308729	0.88[EUR][1000 genomes]
rs1308730	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16874389	0.88[EUR][1000 genomes]
rs6459172	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6914225	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6914405	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6937431	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs723584	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73726011	0.86[AMR][1000 genomes]
rs73726014	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:13874600-13878600	Weak transcription	Esophagus	oesophagus
2	chr6:13874800-13881800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr6:13875000-13880400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr6:13877200-13878000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:13877200-13878000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:13877200-13878400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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