Variant report

Variant	rs12052085
Chromosome Location	chr19:18263871-18263872
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:265)
CpG islands
(count:183)
Chromatin interactive
region (count:19)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:265 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	UBTF	chr19:18263203-18264311	K562	blood:	n/a	n/a
2	PAX5	chr19:18263153-18264314	GM12878	blood:	n/a	chr19:18263645-18263655
3	ELF1	chr19:18263713-18264036	HepG2	liver:	n/a	chr19:18263868-18263881
4	MXI1	chr19:18263152-18264055	K562	blood:	n/a	chr19:18263434-18263449 chr19:18263436-18263451
5	BRCA1	chr19:18263411-18264042	H1-hESC	embryonic stem cell:	n/a	n/a
6	POLR2A	chr19:18263019-18263982	GM12878	blood:	n/a	n/a
7	RELA	chr19:18263175-18264384	GM18951	blood:	n/a	n/a
8	PAX5	chr19:18263215-18264155	GM12891	blood:	n/a	chr19:18263645-18263655
9	MAX	chr19:18263835-18264365	H1-hESC	embryonic stem cell:	n/a	chr19:18264125-18264135
10	RUNX3	chr19:18263009-18264513	GM12878	blood:	n/a	n/a
11	POLR2A	chr19:18263172-18264261	ECC-1	luminal epithelium:	n/a	n/a
12	E2F6	chr19:18263856-18264267	K562	blood:	n/a	chr19:18263962-18263971 chr19:18264131-18264141 chr19:18264128-18264138
13	KAP1	chr19:18263082-18263959	U2OS	brain:	n/a	n/a
14	POLR2A	chr19:18262928-18264418	SK-N-MC	brain:	n/a	n/a
15	MYC	chr19:18263174-18264262	K562	blood:	n/a	chr19:18263436-18263445 chr19:18263440-18263449 chr19:18264125-18264135
16	ZBTB33	chr19:18263140-18264132	A549	lung:	n/a	chr19:18263846-18263861
17	MAZ	chr19:18263169-18264611	K562	blood:	n/a	chr19:18263436-18263445 chr19:18264579-18264589 chr19:18263440-18263449 chr19:18264125-18264135
18	MYC	chr19:18263235-18264331	NB4	blood:	n/a	chr19:18263436-18263445 chr19:18263440-18263449 chr19:18264125-18264135
19	POLR2A	chr19:18263065-18264318	GM18951	blood:	n/a	n/a
20	ELF1	chr19:18263122-18264248	MCF-7	breast:	n/a	chr19:18263868-18263881 chr19:18263276-18263287 chr19:18263277-18263286
21	POLR2A	chr19:18263562-18264241	A549	lung:	n/a	n/a
22	POLR2A	chr19:18263160-18264411	HepG2	liver:	n/a	n/a
23	POLR2A	chr19:18262953-18264305	GM12878	blood:	n/a	n/a
24	POLR2A	chr19:18263553-18263892	HepG2	liver:	n/a	n/a
25	HCFC1	chr19:18263163-18264223	K562	blood:	n/a	n/a
26	UBTF	chr19:18263834-18264137	K562	blood:	n/a	n/a
27	POLR2A	chr19:18263046-18264215	GM12878	blood:	n/a	n/a
28	POLR2A	chr19:18263430-18264475	MCF-7	breast:	n/a	n/a
29	SPI1	chr19:18263159-18264127	HL-60	blood:	n/a	chr19:18263472-18263485
30	POLR2A	chr19:18263107-18264327	PBDE	blood:	n/a	n/a
31	POLR2A	chr19:18262948-18264310	GM12892	blood:	n/a	n/a
32	EBF1	chr19:18263224-18264093	GM12878	blood:	n/a	chr19:18263846-18263859
33	ZBTB33	chr19:18263154-18264278	HCT-116	colon:	n/a	chr19:18263846-18263861
34	POU2F2	chr19:18263080-18263918	GM12891	blood:	n/a	n/a
35	ELK4	chr19:18263220-18263927	HEK293	kidney:	n/a	chr19:18263342-18263353
36	POLR2A	chr19:18262919-18264233	PANC-1	pancreas:	n/a	n/a
37	ZBTB33	chr19:18263604-18264015	HepG2	liver:	n/a	chr19:18263846-18263861
38	POLR2A	chr19:18263078-18264329	HepG2	liver:	n/a	n/a
39	TAF1	chr19:18263143-18264426	H1-hESC	embryonic stem cell:	n/a	n/a
40	POLR2A	chr19:18262689-18263909	Hela-S3	cervix:	n/a	n/a
41	NRF1	chr19:18263858-18263915	GM12878	blood:	n/a	n/a
42	E2F4	chr19:18263237-18264329	MCF10A-Er-Src	breast:	n/a	chr19:18263962-18263971 chr19:18264131-18264141 chr19:18264128-18264138
43	POLR2A	chr19:18263177-18264356	H1-neurons	neurons:	n/a	n/a
44	POLR2A	chr19:18263154-18264617	GM12878	blood:	n/a	n/a
45	CREB1	chr19:18263789-18264180	A549	lung:	n/a	n/a
46	POLR2A	chr19:18263035-18264209	HUVEC	blood vessel:	n/a	n/a
47	ELK1	chr19:18263129-18264072	Hela-S3	cervix:	n/a	chr19:18263869-18263878 chr19:18263869-18263878
48	GTF2F1	chr19:18263136-18263936	Hela-S3	cervix:	n/a	n/a
49	POLR2A	chr19:18263609-18263885	A549	lung:	n/a	n/a
50	MAX	chr19:18263114-18264345	A549	lung:	n/a	chr19:18263436-18263445 chr19:18263440-18263449 chr19:18264125-18264135

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:18263865-18263915	K562	blood:	n/a
2	chr19:18263865-18263915	HRPEpiC	eye:	n/a
3	chr19:18263851-18263901	HRCEpiC	kidney:	n/a
4	chr19:18263851-18263901	SKMC	muscle:	n/a
5	chr19:18263865-18263915	MCF-7	breast:	n/a
6	chr19:18263861-18263911	SK-N-SH_RA	brain:	n/a
7	chr19:18263851-18263901	HCT-116	colon:	n/a
8	chr19:18263851-18263901	HepG2	liver:	n/a
9	chr19:18263851-18263901	HMEC	breast:	n/a
10	chr19:18263851-18263901	IMR90	lung:	fetal
11	chr19:18263861-18263911	HRCEpiC	kidney:	n/a
12	chr19:18263851-18263901	Hela-S3	cervix:	n/a
13	chr19:18263851-18263901	PrEC	prostate:	n/a
14	chr19:18263861-18263911	Hela-S3	cervix:	n/a
15	chr19:18263865-18263915	HNPCEpiC	eye:	n/a
16	chr19:18263865-18263915	LNCaP	prostate:	n/a
17	chr19:18263851-18263901	GM06990	blood:	n/a
18	chr19:18263865-18263915	MCF10A-Er-Src	breast:	n/a
19	chr19:18263865-18263915	CMK	blood:	n/a
20	chr19:18263865-18263915	HIPEpiC	eye:	n/a
21	chr19:18263861-18263911	IMR90	lung:	fetal
22	chr19:18263851-18263901	SAEC	small airway:	n/a
23	chr19:18263851-18263901	PANC-1	pancreas:	n/a
24	chr19:18263851-18263901	RPTEC	kidney:	n/a
25	chr19:18263861-18263911	PrEC	prostate:	n/a
26	chr19:18263861-18263911	AG04450	lung:	fetal
27	chr19:18263865-18263915	PANC-1	pancreas:	n/a
28	chr19:18263861-18263911	SKMC	muscle:	n/a
29	chr19:18263861-18263911	BJ	skin:	n/a
30	chr19:18263865-18263915	GM06990	blood:	n/a
31	chr19:18263861-18263911	CMK	blood:	n/a
32	chr19:18263861-18263911	H1-hESC	embryonic stem cell:	embryo
33	chr19:18263861-18263911	NHDF-neo	bronchial:	n/a
34	chr19:18263851-18263901	SK-N-SH	brain:	n/a
35	chr19:18263861-18263911	GM12891	blood:	n/a
36	chr19:18263865-18263915	NH-A	brain:	n/a
37	chr19:18263861-18263911	ProgFib	skin:	n/a
38	chr19:18263861-18263911	Jurkat	blood:	n/a
39	chr19:18263865-18263915	AG10803	skin:	n/a
40	chr19:18263851-18263901	HCM	heart:	n/a
41	chr19:18263851-18263901	HEK293	kidney:	embryo
42	chr19:18263865-18263915	HepG2	liver:	n/a
43	chr19:18263861-18263911	HNPCEpiC	eye:	n/a
44	chr19:18263851-18263901	HAEpiC	amniotic membrane:	n/a
45	chr19:18263865-18263915	AoSMC	blood vessel:	n/a
46	chr19:18263865-18263915	Hela-S3	cervix:	n/a
47	chr19:18263861-18263911	AG04449	skin:	fetal
48	chr19:18263865-18263915	A549	lung:	n/a
49	chr19:18263865-18263915	SAEC	small airway:	n/a
50	chr19:18263865-18263915	RPTEC	kidney:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:18263268..18265586-chr19:18343250..18345194,2	MCF-7	breast:
2	chr19:18263543..18265261-chr19:18334680..18337167,2	MCF-7	breast:
3	chr19:18262556..18266763-chr19:18301801..18307197,7	K562	blood:
4	chr19:18219638..18222219-chr19:18263591..18265639,2	K562	blood:
5	chr19:18263338..18265453-chr19:18334676..18336331,2	K562	blood:
6	chr19:18263193..18264879-chr19:18450426..18452528,2	K562	blood:
7	chr19:18131620..18134141-chr19:18262452..18265471,3	K562	blood:
8	chr19:18111522..18113675-chr19:18263601..18266020,2	MCF-7	breast:
9	chr19:18260692..18269532-chr19:18383927..18395911,19	K562	blood:
10	chr13:20176038..20176600-chr19:18263160..18263911,2	Hela-S3	cervix:
11	chr19:18262015..18264258-chr19:18383927..18386552,2	K562	blood:
12	chr11:67272571..67273414-chr19:18263836..18264400,2	Hela-S3	cervix:
13	chr19:18260584..18267400-chr19:18276077..18285960,14	MCF-7	breast:
14	chr19:18220648..18224657-chr19:18263294..18266426,4	MCF-7	breast:
15	chr19:18218810..18222219-chr19:18263257..18265639,4	K562	blood:
16	chr19:17970168..17972112-chr19:18263471..18265985,2	K562	blood:
17	chr19:18261707..18265058-chr19:18302365..18306548,5	K562	blood:
18	chr19:18263401..18266218-chr19:18302169..18305024,2	MCF-7	breast:
19	chr19:18252573..18256053-chr19:18260379..18264936,4	K562	blood:

No data

Variant related genes	Relation type
ENSG00000268173	TF binding region
PIK3R2	TF binding region
ENSG00000269145	TF binding region
ENSG00000268173	CpG island
PIK3R2	CpG island
ENSG00000269145	CpG island
ENSG00000105643	Chromatin interaction
ENSG00000254858	Chromatin interaction
ENSG00000130517	Chromatin interaction
ENSG00000105647	Chromatin interaction
ENSG00000267959	Chromatin interaction
ENSG00000110697	Chromatin interaction
ENSG00000105640	Chromatin interaction
ENSG00000216490	Chromatin interaction
ENSG00000130518	Chromatin interaction
ENSG00000268032	Chromatin interaction
ENSG00000099308	Chromatin interaction
ENSG00000130522	Chromatin interaction
ENSG00000105650	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2173006	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs273496	0.82[EUR][1000 genomes]
rs273512	0.83[EUR][1000 genomes]
rs3730179	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3746187	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55989116	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62123609	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62123615	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs62123617	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1055932	chr19:17923918-18369944	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
2	nsv543923	chr19:17923918-18369944	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
3	nsv532614	chr19:18033043-18573963	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	204 gene(s)	inside rSNPs	diseases
4	esv1837595	chr19:18085428-18393682	Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	147 gene(s)	inside rSNPs	diseases
5	nsv833773	chr19:18152971-18302988	Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv911241	chr19:18193191-18304700	Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
7	nsv911242	chr19:18201757-18304700	Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
8	nsv911243	chr19:18206681-18283501	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
9	nsv911244	chr19:18206681-18304700	Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
10	nsv911245	chr19:18206681-18338101	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
11	nsv833774	chr19:18213761-18295329	Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
12	nsv833775	chr19:18213761-18390074	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
13	nsv911246	chr19:18224729-18283501	Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
14	nsv911247	chr19:18224729-18288069	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
15	nsv911248	chr19:18224729-18338101	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
16	nsv911249	chr19:18224729-18375846	Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
17	nsv911250	chr19:18224729-18376522	Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
18	nsv911251	chr19:18224729-18422364	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
19	nsv2429	chr19:18234179-18279381	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	nsv911252	chr19:18234588-18338101	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
21	nsv911253	chr19:18240127-18418044	Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
22	nsv916325	chr19:18244780-18534927	Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	167 gene(s)	inside rSNPs	diseases
23	nsv911254	chr19:18248146-18310678	Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
24	nsv911255	chr19:18254876-18282586	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
25	nsv911256	chr19:18255359-18338101	Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
26	nsv911257	chr19:18258598-18282586	Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
27	nsv911258	chr19:18262371-18282586	Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:18262600-18264600	Active TSS	Psoas Muscle	Psoas
2	chr19:18262600-18264800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr19:18262600-18264800	Active TSS	Colon Smooth Muscle	Colon
4	chr19:18262600-18265200	Active TSS	H9 Cell Line	embryonic stem cell
5	chr19:18262600-18265400	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr19:18262600-18265400	Active TSS	HSMMtube	muscle
7	chr19:18262600-18265600	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr19:18262800-18264200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr19:18262800-18264400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr19:18262800-18264400	Active TSS	Osteobl	bone
11	chr19:18262800-18264600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr19:18262800-18264600	Active TSS	Primary T cells from cord blood	blood
13	chr19:18262800-18264600	Active TSS	Primary T helper naive cells from peripheral blood	blood
14	chr19:18262800-18264600	Active TSS	Brain Hippocampus Middle	brain
15	chr19:18262800-18264600	Active TSS	Duodenum Smooth Muscle	Duodenum
16	chr19:18262800-18264600	Active TSS	Fetal Stomach	stomach
17	chr19:18262800-18264600	Active TSS	Thymus	Thymus
18	chr19:18262800-18264600	Active TSS	HUVEC	blood vessel
19	chr19:18262800-18264800	Active TSS	H1 Cell Line	embryonic stem cell
20	chr19:18262800-18264800	Active TSS	HUES6 Cell Line	embryonic stem cell
21	chr19:18262800-18264800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr19:18262800-18264800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr19:18262800-18264800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
24	chr19:18262800-18264800	Active TSS	Fetal Lung	lung
25	chr19:18262800-18264800	Active TSS	Left Ventricle	heart
26	chr19:18262800-18264800	Active TSS	Rectal Smooth Muscle	rectum
27	chr19:18262800-18264800	Active TSS	Right Ventricle	heart
28	chr19:18262800-18264800	Active TSS	GM12878-XiMat	blood
29	chr19:18262800-18264800	Active TSS	Hela-S3	cervix
30	chr19:18262800-18264800	Active TSS	K562	blood
31	chr19:18262800-18264800	Active TSS	NH-A	brain
32	chr19:18262800-18264800	Active TSS	NHLF	lung
33	chr19:18262800-18265000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr19:18262800-18265000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr19:18262800-18265000	Active TSS	HSMM	muscle
36	chr19:18262800-18265200	Active TSS	A549	lung
37	chr19:18262800-18265200	Active TSS	NHDF-Ad	bronchial
38	chr19:18262800-18265400	Active TSS	HepG2	liver
39	chr19:18262800-18265600	Active TSS	HUES64 Cell Line	embryonic stem cell
40	chr19:18262800-18265600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr19:18262800-18265600	Active TSS	Fetal Kidney	kidney
42	chr19:18263000-18264000	Active TSS	Monocytes-CD14+_RO01746	blood
43	chr19:18263000-18264200	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
44	chr19:18263000-18264200	Active TSS	Brain Germinal Matrix	brain
45	chr19:18263000-18264400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr19:18263000-18264400	Active TSS	Primary T helper cells PMA-I stimulated	--
47	chr19:18263000-18264400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
48	chr19:18263000-18264400	Active TSS	Cortex derived primary cultured neurospheres	brain
49	chr19:18263000-18264600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
50	chr19:18263000-18264600	Active TSS	Primary T helper naive cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links