Variant report

Variant rs12055438
Chromosome Location chr6:35541058-35541059
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35530600-35543200 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr6:35533600-35563800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:35534400-35541200 Weak transcription Colon Smooth Muscle Colon
4 chr6:35534400-35569000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:35534800-35544600 Weak transcription H1 Cell Line embryonic stem cell
6 chr6:35535000-35554200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr6:35535000-35564600 Weak transcription H9 Cell Line embryonic stem cell
8 chr6:35535200-35543400 Weak transcription HSMMtube muscle
9 chr6:35535600-35541200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr6:35535600-35541600 Weak transcription Primary T cells fromperipheralblood blood
11 chr6:35535800-35541400 Weak transcription K562 blood
12 chr6:35535800-35541600 Weak transcription Ovary ovary
13 chr6:35535800-35541600 Weak transcription HepG2 liver
14 chr6:35536200-35542200 Weak transcription Brain Hippocampus Middle brain
15 chr6:35537000-35541600 Weak transcription Brain Cingulate Gyrus brain
16 chr6:35537000-35541600 Weak transcription Right Ventricle heart
17 chr6:35537000-35543000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr6:35537000-35543200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:35537200-35541400 Weak transcription Gastric stomach
20 chr6:35537200-35541400 Weak transcription NHEK skin
21 chr6:35537400-35541400 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:35537400-35543000 Weak transcription Fetal Muscle Trunk muscle
23 chr6:35537800-35542000 Weak transcription HUVEC blood vessel
24 chr6:35538200-35541600 Weak transcription Pancreas Pancrea
25 chr6:35538200-35545000 Strong transcription Muscle Satellite Cultured Cells --
26 chr6:35538400-35541600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr6:35538400-35541600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr6:35538400-35541600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr6:35538400-35541600 Weak transcription Psoas Muscle Psoas
30 chr6:35538400-35551800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr6:35538600-35551600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr6:35538800-35548200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:35539000-35542000 Weak transcription Primary hematopoietic stem cells blood
34 chr6:35539000-35542200 Weak transcription Primary B cells from peripheral blood blood
35 chr6:35539000-35542200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr6:35539000-35542200 Weak transcription Fetal Muscle Leg muscle
37 chr6:35539000-35542600 Weak transcription Placenta Amnion Placenta Amnion
38 chr6:35539000-35545200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:35539000-35551800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr6:35539000-35551800 Strong transcription Thymus Thymus
41 chr6:35539000-35553400 Weak transcription Osteobl bone
42 chr6:35539200-35541600 Weak transcription Spleen Spleen
43 chr6:35539200-35542000 Weak transcription Colonic Mucosa Colon
44 chr6:35539200-35542200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr6:35539200-35545000 Strong transcription HSMM muscle
46 chr6:35539200-35546000 Strong transcription HMEC breast
47 chr6:35539200-35548200 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr6:35539200-35548200 Strong transcription Sigmoid Colon Sigmoid Colon
49 chr6:35539200-35548400 Strong transcription Stomach Smooth Muscle stomach
50 chr6:35539200-35549600 Strong transcription Left Ventricle heart

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