Variant report

rSNPs within LD-proxies of this variant (count:6)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873148	chr1:210665583-210994339	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv522480	chr1:210779936-210848344	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases
3	esv1825229	chr1:210789477-210854976	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210790400-210801800	Weak transcription	Pancreas	Pancrea
2	chr1:210790600-210807000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:210795000-210801400	Weak transcription	Aorta	Aorta
4	chr1:210795400-210822600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr1:210795800-210806600	Weak transcription	Primary hematopoietic stem cells	blood
6	chr1:210796200-210801400	Weak transcription	Left Ventricle	heart
7	chr1:210797000-210801800	Weak transcription	Ovary	ovary
8	chr1:210798600-210806200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr1:210799000-210800400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr1:210799000-210804600	Weak transcription	Brain Angular Gyrus	brain
11	chr1:210799000-210804600	Weak transcription	Brain Cingulate Gyrus	brain
12	chr1:210799200-210801600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr1:210799200-210805000	Weak transcription	Brain Anterior Caudate	brain
14	chr1:210799200-210807000	Weak transcription	HSMM	muscle
15	chr1:210799400-210800400	Enhancers	NHDF-Ad	bronchial
16	chr1:210799400-210801400	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr1:210799400-210802600	Weak transcription	Brain Substantia Nigra	brain
18	chr1:210799800-210801200	Weak transcription	Brain Hippocampus Middle	brain
19	chr1:210799800-210801200	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr1:210799800-210801600	Weak transcription	HSMMtube	muscle

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