The 2.0 version of rSNPBase

Variant report

Variant rs12070692
Chromosome Location chr1:45445388-45445389
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45389200-45450200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45414000-45450800 Weak transcription Rectal Smooth Muscle rectum
3 chr1:45414000-45451000 Weak transcription Spleen Spleen
4 chr1:45421000-45450800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:45424800-45445600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:45425000-45445600 Weak transcription Aorta Aorta
7 chr1:45430800-45450800 Weak transcription Brain Substantia Nigra brain
8 chr1:45433200-45451000 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr1:45434400-45450800 Weak transcription Small Intestine intestine
10 chr1:45435600-45447400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:45435600-45447600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:45436000-45447000 Strong transcription Fetal Muscle Leg muscle
13 chr1:45436200-45446800 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:45436400-45450800 Weak transcription HMEC breast
15 chr1:45436600-45450800 Weak transcription Stomach Mucosa stomach
16 chr1:45437200-45446800 Strong transcription Fetal Thymus thymus
17 chr1:45437400-45446600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:45437400-45447400 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr1:45437600-45446800 Strong transcription Cortex derived primary cultured neurospheres brain
20 chr1:45437600-45447000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:45437600-45447200 Strong transcription Fetal Muscle Trunk muscle
22 chr1:45437800-45446800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:45438000-45451000 Weak transcription A549 lung
24 chr1:45438200-45446800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:45438200-45447200 Strong transcription Primary T cells fromperipheralblood blood
26 chr1:45438200-45450800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:45438400-45446800 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr1:45438400-45446800 Strong transcription Duodenum Mucosa Duodenum
29 chr1:45438400-45447000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:45438400-45447200 Strong transcription Dnd41 blood
31 chr1:45438400-45451000 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:45438600-45447200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:45438600-45450800 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:45439600-45446800 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr1:45439600-45447200 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr1:45439800-45445400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:45439800-45445400 Strong transcription Fetal Intestine Large intestine
38 chr1:45439800-45447000 Strong transcription Primary monocytes fromperipheralblood blood
39 chr1:45440000-45445800 Strong transcription Fetal Lung lung
40 chr1:45440000-45446800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:45440000-45446800 Strong transcription Brain Angular Gyrus brain
42 chr1:45440400-45447000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:45440400-45447200 Strong transcription Liver Liver
44 chr1:45440400-45451400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr1:45440600-45446800 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr1:45440600-45446800 Strong transcription Ovary ovary
47 chr1:45440600-45447000 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr1:45440600-45447200 Strong transcription Brain Hippocampus Middle brain
49 chr1:45440600-45447200 Strong transcription Stomach Smooth Muscle stomach
50 chr1:45440600-45447200 Strong transcription K562 blood

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Last update: Aug 31, 2015