Variant report

Variant	rs12075147
Chromosome Location	chr1:217116877-217116878
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1030844	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11572445	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11572474	1.00[CEU][hapmap]
rs1370151	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2576198	1.00[CEU][hapmap]
rs2576272	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2818753	1.00[JPT][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61818593	0.85[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217111000-217125400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr1:217111200-217118000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr1:217112000-217117600	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr1:217112200-217117800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:217112400-217117800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr1:217113000-217117000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr1:217113800-217117600	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr1:217114000-217117600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr1:217114400-217117000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr1:217114400-217117800	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr1:217116600-217117400	Enhancers	Left Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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