The 2.0 version of rSNPBase

Variant report

Variant rs12079094
Chromosome Location chr1:184379174-184379175
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184359000-184382800 Weak transcription Fetal Stomach stomach
2 chr1:184359600-184391200 Weak transcription Duodenum Mucosa Duodenum
3 chr1:184360600-184386200 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr1:184362600-184386200 Weak transcription Lung lung
5 chr1:184372200-184382800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:184374600-184379200 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:184374600-184379200 Enhancers iPS-15b Cell Line embryonic stem cell
8 chr1:184375200-184379200 Weak transcription Fetal Brain Male brain
9 chr1:184377400-184387200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:184377800-184385800 Weak transcription Colon Smooth Muscle Colon
11 chr1:184377800-184387000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:184378000-184384600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:184378000-184395600 Weak transcription Brain Germinal Matrix brain
14 chr1:184378200-184379200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:184378200-184387000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:184378200-184402400 Weak transcription Fetal Lung lung
17 chr1:184378400-184382600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:184378400-184385800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:184378400-184386200 Weak transcription Right Atrium heart
20 chr1:184378400-184388200 Weak transcription Fetal Muscle Leg muscle
21 chr1:184378400-184394200 Weak transcription Fetal Intestine Small intestine
22 chr1:184378400-184397400 Weak transcription Ovary ovary
23 chr1:184378600-184380800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:184378600-184382600 Weak transcription Right Ventricle heart
25 chr1:184378600-184384200 Weak transcription HMEC breast
26 chr1:184378600-184384200 Weak transcription NHEK skin
27 chr1:184378600-184385600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:184378600-184385600 Weak transcription NHLF lung
29 chr1:184378600-184386200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:184378600-184388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:184378800-184383000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:184378800-184384600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:184378800-184388200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:184378800-184388200 Weak transcription NHDF-Ad bronchial
35 chr1:184378800-184389000 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:184379000-184380000 Weak transcription Psoas Muscle Psoas
37 chr1:184379000-184384000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:184379000-184384200 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr1:184379000-184384200 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr1:184379000-184384400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr1:184379000-184384800 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr1:184379000-184385800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:184379000-184386200 Weak transcription Left Ventricle heart
44 chr1:184379000-184393000 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015