The 2.0 version of rSNPBase

Variant report

Variant rs61823542
Chromosome Location chr1:184401547-184401548
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184378200-184402400 Weak transcription Fetal Lung lung
2 chr1:184383800-184412400 Weak transcription Fetal Stomach stomach
3 chr1:184387200-184403400 Weak transcription Aorta Aorta
4 chr1:184390600-184401600 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr1:184390600-184422400 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:184392200-184408200 Weak transcription Esophagus oesophagus
7 chr1:184395000-184402200 Weak transcription Pancreas Pancrea
8 chr1:184395000-184405600 Weak transcription Fetal Intestine Small intestine
9 chr1:184395200-184405000 Weak transcription Fetal Intestine Large intestine
10 chr1:184395400-184408000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:184395800-184405600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:184396000-184412800 Weak transcription Fetal Muscle Leg muscle
13 chr1:184396200-184402400 Weak transcription Stomach Mucosa stomach
14 chr1:184396200-184412800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:184396200-184418800 Weak transcription NHEK skin
16 chr1:184396200-184419000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:184396400-184402200 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:184396400-184430000 Weak transcription Spleen Spleen
19 chr1:184396800-184404800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:184397000-184402200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:184397000-184402200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:184397200-184402200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:184398200-184402200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:184398200-184402200 Weak transcription Psoas Muscle Psoas
25 chr1:184398200-184402800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:184398200-184404600 Weak transcription Lung lung
27 chr1:184398400-184402000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:184398400-184403400 Weak transcription Left Ventricle heart
29 chr1:184398400-184403400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:184398400-184405000 Weak transcription Right Ventricle heart
31 chr1:184398400-184405200 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:184398400-184410200 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:184398600-184402200 Weak transcription Right Atrium heart
34 chr1:184398600-184411400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:184398800-184403400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:184398800-184418800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:184400400-184412800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015