The 2.0 version of rSNPBase

Variant report

Variant rs12086443
Chromosome Location chr1:169638470-169638471
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169635800-169638600 Enhancers Primary B cells from peripheral blood blood
2 chr1:169636000-169638600 Enhancers Primary T cells fromperipheralblood blood
3 chr1:169636000-169638600 Enhancers Primary T helper cells fromperipheralblood blood
4 chr1:169636000-169638600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:169636000-169638800 Enhancers Primary monocytes fromperipheralblood blood
6 chr1:169636200-169638600 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr1:169636200-169638600 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr1:169637200-169640000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:169637400-169638600 Enhancers Dnd41 blood
10 chr1:169637400-169639800 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:169637400-169640000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:169637400-169640000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:169637400-169640000 Weak transcription Fetal Thymus thymus
14 chr1:169637600-169638600 Enhancers Primary neutrophils fromperipheralblood blood
15 chr1:169637600-169639800 Weak transcription Primary hematopoietic stem cells blood
16 chr1:169637600-169639800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:169637600-169645200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:169638000-169638600 Enhancers Primary T helper cells PMA-I stimulated --
19 chr1:169638200-169639800 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:169638200-169640000 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:169638200-169645400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr1:169638400-169638600 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr1:169638400-169639800 Weak transcription Primary B cells from cord blood blood
24 chr1:169638400-169639800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr1:169638400-169641400 Enhancers Primary T cells from cord blood blood

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Last update: Aug 31, 2015