Variant report

Variant	rs12098663
Chromosome Location	chr10:117201601-117201602
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10787572	0.86[LWK][hapmap];0.81[MKK][hapmap];0.85[AFR][1000 genomes]
rs12098698	0.90[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17093102	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs2172668	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs584572	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs588666	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs596330	1.00[MEX][hapmap]
rs604215	0.82[ASW][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs611172	0.82[ASW][hapmap];1.00[TSI][hapmap]
rs633750	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs634209	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs678632	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs679513	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs681544	1.00[EUR][1000 genomes]
rs7072927	1.00[TSI][hapmap]
rs73369798	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7476664	1.00[TSI][hapmap]
rs7893964	1.00[TSI][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117201600-117202200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links