Variant report

Variant	rs604215
Chromosome Location	chr10:117203222-117203223
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12098663	0.82[ASW][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12098698	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17093102	1.00[TSI][hapmap]
rs2172668	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs584572	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs585354	0.83[YRI][hapmap]
rs588666	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs611172	1.00[ASW][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs633750	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs634209	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs678632	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs679513	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs681544	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7072927	1.00[TSI][hapmap]
rs73369798	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7476664	1.00[TSI][hapmap]
rs7893964	1.00[TSI][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117202200-117210800	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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