Variant report

Variant rs12116492
Chromosome Location chr1:150534368-150534369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150529800-150536800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
2 chr1:150532400-150537000 Flanking Active TSS Primary B cells from cord blood blood
3 chr1:150532400-150537000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr1:150532600-150536400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:150532600-150536800 Flanking Active TSS Primary T cells fromperipheralblood blood
6 chr1:150532600-150536800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:150532800-150535000 Flanking Active TSS HMEC breast
8 chr1:150532800-150536600 Flanking Active TSS Primary hematopoietic stem cells blood
9 chr1:150533200-150534400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:150533200-150534400 Active TSS Brain Substantia Nigra brain
11 chr1:150533200-150534600 Active TSS Brain Anterior Caudate brain
12 chr1:150533200-150534600 Active TSS Fetal Kidney kidney
13 chr1:150533200-150534800 Active TSS Psoas Muscle Psoas
14 chr1:150533200-150535000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:150533200-150535000 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr1:150533200-150535000 Active TSS Esophagus oesophagus
17 chr1:150533200-150535000 Active TSS Right Ventricle heart
18 chr1:150533200-150535200 Active TSS iPS-20b Cell Line embryonic stem cell
19 chr1:150533200-150535200 Active TSS Aorta Aorta
20 chr1:150533200-150536400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
21 chr1:150533400-150534400 Active TSS Breast Myoepithelial Primary Cells Breast
22 chr1:150533400-150534400 Active TSS Brain Angular Gyrus brain
23 chr1:150533400-150534400 Active TSS GM12878-XiMat blood
24 chr1:150533400-150534600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:150533400-150534600 Active TSS Lung lung
26 chr1:150533400-150534600 Active TSS Placenta Amnion Placenta Amnion
27 chr1:150533400-150534600 Active TSS Sigmoid Colon Sigmoid Colon
28 chr1:150533400-150534600 Flanking Active TSS Stomach Mucosa stomach
29 chr1:150533400-150534800 Active TSS HUES6 Cell Line embryonic stem cell
30 chr1:150533400-150534800 Active TSS HUES64 Cell Line embryonic stem cell
31 chr1:150533400-150534800 Active TSS iPS-18 Cell Line embryonic stem cell
32 chr1:150533400-150534800 Active TSS Brain Cingulate Gyrus brain
33 chr1:150533400-150534800 Flanking Active TSS Brain Germinal Matrix brain
34 chr1:150533400-150534800 Active TSS Small Intestine intestine
35 chr1:150533400-150535000 Active TSS H1 Cell Line embryonic stem cell
36 chr1:150533400-150535000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:150533400-150535000 Active TSS HUES48 Cell Line embryonic stem cell
38 chr1:150533400-150535000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
39 chr1:150533400-150535000 Active TSS Primary T killer memory cells from peripheral blood blood
40 chr1:150533400-150535000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
41 chr1:150533400-150535000 Flanking Active TSS Placenta Placenta
42 chr1:150533400-150535000 Active TSS Left Ventricle heart
43 chr1:150533400-150535400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:150533400-150535400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
45 chr1:150533400-150535400 Active TSS Pancreatic Islets Pancreatic Islet
46 chr1:150533400-150535400 Flanking Active TSS Dnd41 blood
47 chr1:150533400-150535600 Flanking Active TSS Primary monocytes fromperipheralblood blood
48 chr1:150533400-150535800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
49 chr1:150533400-150536600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
50 chr1:150533400-150536600 Flanking Active TSS Fetal Thymus thymus

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