Variant report

Variant rs55862611
Chromosome Location chr1:150546316-150546317
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150534400-150547200 Weak transcription Ovary ovary
2 chr1:150541400-150547200 Genic enhancers Fetal Intestine Small intestine
3 chr1:150541400-150549200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:150541800-150546800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr1:150542000-150547200 Genic enhancers Primary monocytes fromperipheralblood blood
6 chr1:150542200-150547200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:150542200-150547200 Strong transcription Brain Germinal Matrix brain
8 chr1:150542200-150548000 Genic enhancers Placenta Placenta
9 chr1:150542400-150546800 Genic enhancers Fetal Muscle Leg muscle
10 chr1:150542400-150547000 Strong transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:150542600-150547200 Genic enhancers Lung lung
12 chr1:150542600-150548200 Genic enhancers Cortex derived primary cultured neurospheres brain
13 chr1:150542800-150547800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:150542800-150551600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
15 chr1:150543000-150549200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:150543200-150547000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:150543400-150547000 Genic enhancers Osteobl bone
18 chr1:150543600-150547200 Genic enhancers Dnd41 blood
19 chr1:150543600-150547800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr1:150543600-150548200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:150543600-150552000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
22 chr1:150543600-150552000 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
23 chr1:150543600-150552000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:150543800-150547000 Strong transcription Fetal Lung lung
25 chr1:150544000-150547000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:150544000-150547200 Strong transcription Fetal Stomach stomach
27 chr1:150544000-150547400 Weak transcription Fetal Brain Male brain
28 chr1:150544200-150551600 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
29 chr1:150544400-150546400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:150544400-150547200 Genic enhancers Fetal Intestine Large intestine
31 chr1:150544600-150551600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
32 chr1:150544800-150546800 Genic enhancers HUVEC blood vessel
33 chr1:150544800-150547000 Genic enhancers Left Ventricle heart
34 chr1:150544800-150548400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:150545000-150546600 Genic enhancers Colonic Mucosa Colon
36 chr1:150545000-150546800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:150545000-150546800 Genic enhancers HMEC breast
38 chr1:150545000-150547200 Genic enhancers A549 lung
39 chr1:150545000-150548600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:150545000-150550000 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
41 chr1:150545000-150551400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
42 chr1:150545200-150546400 Transcr. at gene 5' and 3' NH-A brain
43 chr1:150545200-150546600 Strong transcription Fetal Kidney kidney
44 chr1:150545200-150547000 Genic enhancers Hela-S3 cervix
45 chr1:150545200-150547200 Genic enhancers Brain Anterior Caudate brain
46 chr1:150545200-150547200 Genic enhancers NHDF-Ad bronchial
47 chr1:150545200-150547400 Genic enhancers HepG2 liver
48 chr1:150545200-150548400 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:150545200-150550200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:150545200-150551000 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast

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