Variant report

Variant	rs12123627
Chromosome Location	chr1:211899271-211899272
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11119797	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12130915	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12145195	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12145981	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56230302	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7512315	0.81[EUR][1000 genomes]
rs7525086	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7543710	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7545954	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211879200-211913600	Weak transcription	Right Atrium	heart
2	chr1:211896400-211909000	Weak transcription	Fetal Intestine Small	intestine
3	chr1:211898200-211900200	Enhancers	Brain Inferior Temporal Lobe	brain
4	chr1:211898800-211899800	Weak transcription	Fetal Muscle Leg	muscle
5	chr1:211898800-211900000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr1:211898800-211903800	Weak transcription	Brain Hippocampus Middle	brain
7	chr1:211898800-211906800	Weak transcription	Pancreas	Pancrea
8	chr1:211899000-211900000	Weak transcription	Brain Anterior Caudate	brain
9	chr1:211899000-211904800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr1:211899200-211899600	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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